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Report for CCDS89756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89756.1 Public Mus musculus 4 Zfp37 23 108 98 CCDS HistoryNCBI Gene:22696Re-query CCDS DB by CCDS ID:89756.1Re-query CCDS DB by GeneID:22696See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89756.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000221329.1 ENSMUSP00000152266.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000221329.1Link to Ensembl Protein Viewer:ENSMUSP00000152266.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000221329Re-query CCDS DB by Protein ID:ENSMUSP00000152266
Original member NCBI NM_001290351.1 NP_001277280.1 Updated not alive Link to Nucleotide Sequence:NM_001290351.1Link to Protein Sequence:NP_001277280.1Re-query CCDS DB by Nucleotide ID:NM_001290351Re-query CCDS DB by Protein ID:NP_001277280
Current member NCBI NM_001290351.2 NP_001277280.1 Accepted alive Link to Nucleotide Sequence:NM_001290351.2Link to Protein Sequence:NP_001277280.1Re-query CCDS DB by Nucleotide ID:NM_001290351Re-query CCDS DB by Protein ID:NP_001277280Link to BLAST:NP_001277280.1

Chromosomal Locations for CCDS 89756.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62191164 62192689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62204519 62204650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62205024 62205108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62208329 62208361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1776 nt):
ATGGCTACATCCGAGCCTGCGGAAAGCGATGCGAAGGAATGGGAGCAGCTGGAACCTGTGCAGAGAGATG
TGTACAAGGATACGAAGCTAGAGAACTGCAGCAATCCAGCCTCCATGGGAAATCAAGATCCCAAACAAGA
CATAGTCTCCGTGTTGGAAGAAGAAGAGCCATCATCGGGAAAGGGGAAAAAAGCCAGCCCAAGTAGTCTG
AAAAAAATAGCAAGGCCCAAGACAGCAGGAACAAGTGCAAAACTCCAACAAGATGATGAGCATAGGGAGG
AAAAGCAGAAGTCCCAAAGCAAACTTACTAAGGAAGTGACACTCAGGAAGAAAAGTTCCAACAGCAAGAA
AAGCAGTGAGTATGGTTTGTTGGAGAACAAAAGTCTCCACTCAAAACACACTCCTTCCGAGAAAAAACTG
CTTAAGTCCAGTTCCCGTGGGAAGAACTCGAATCAGAATTCAGACTCTCTGAAAAAGAAACCTGACACAG
CTAATGACCACAGGAAATCACTCAGCCATTCTGCATCTGATGTGAACAAAGATGAAATTCCAACTAGAAA
GAAATGCGACAAGTTACCCAACAATAAGTTGTCTGATAAAGGTGACAAAAACCAAACCAGCAAAAAATGT
GAGAAAGTATGCCGTCATAGTGCATCCCATACCAAGGAAGACAAAATTCAGACCGGGGAGAAACGGAAAT
CACACTGCCGTACTCCATCTAAACCTGAAAAAGCCCCAGGTTCTGGGAAACCTTATGAATGTAACCACTG
TGGGAAGGTCCTCAGCCATAAACAGGGACTCCTTGACCATCAAAGAACTCACACTGGGGAGAAACCATAT
GAATGTAATGAATGTGGGATAGCTTTCAGCCAGAAGTCCCACCTTGTTGTACATCAGAGAACTCACACTG
GGGAAAAACCATACGAGTGTGAACAGTGTGGCAAAGCACACGGACATAAACATGCCCTCACTGACCATCT
AAGAATCCATACTGGAGAAAAGCCCTACAAATGTAATGAATGTGGCAAAACGTTTAGACACAGCTCAAAC
CTTATGCAACACCTAAGATCTCACACGGGTGAGAAGCCGTATGAATGTAAGGAATGTGGCAAATCCTTTA
GATATAATTCATCTCTTACTGAACATGTGAGAACACACACAGGTGAAATACCATACGAATGTAACGAATG
TGGCAAAGCTTTCAAGTATGGCTCATCCCTGACTAAACATATGCGGATTCATACAGGGGAGAAACCATTT
GAATGTAATGAATGTGGGAAAACTTTTAGCAAAAAGTCACACCTAGTTATACATCAAAGAACTCATACAA
AGGAGAAACCTTATAAATGTGATGAGTGTGGGAAAGCCTTTGGACATAGCTCATCTCTTACCTACCATAT
GAGAACTCATACAGGTGACTGCCCCTTTGAATGTAATCAATGTGGTAAGGCCTTTAAACAGATTGAAGGC
CTTACCCAACACCAGAGAGTTCACACAGGGGAGAAACCCTATGAGTGTGTTGAATGTGGGAAAGCCTTTA
GTCAGAAGTCACACCTCATCGTACACCAGAGAACTCATACAGGGGAGAAACCCTTTGAATGTTATGAGTG
TGGAAAAGCCTTCAATGCAAAATCACAACTTGTTATTCATCAGAGATCCCACACTGGAGAGAAACCCTAT
GAATGTATTGAATGTGGTAAAGCCTTCAAGCAAAATGCCTCTCTTACCAAACATATGAAAATTCACTCAG
AAGAACAATCTGAGGAAGAAGATTAA

Translation (591 aa):
MATSEPAESDAKEWEQLEPVQRDVYKDTKLENCSNPASMGNQDPKQDIVSVLEEEEPSSGKGKKASPSSL
KKIARPKTAGTSAKLQQDDEHREEKQKSQSKLTKEVTLRKKSSNSKKSSEYGLLENKSLHSKHTPSEKKL
LKSSSRGKNSNQNSDSLKKKPDTANDHRKSLSHSASDVNKDEIPTRKKCDKLPNNKLSDKGDKNQTSKKC
EKVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGSGKPYECNHCGKVLSHKQGLLDHQRTHTGEKPY
ECNECGIAFSQKSHLVVHQRTHTGEKPYECEQCGKAHGHKHALTDHLRIHTGEKPYKCNECGKTFRHSSN
LMQHLRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYGSSLTKHMRIHTGEKPF
ECNECGKTFSKKSHLVIHQRTHTKEKPYKCDECGKAFGHSSSLTYHMRTHTGDCPFECNQCGKAFKQIEG
LTQHQRVHTGEKPYECVECGKAFSQKSHLIVHQRTHTGEKPFECYECGKAFNAKSQLVIHQRSHTGEKPY
ECIECGKAFKQNASLTKHMKIHSEEQSEEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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