NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS90343.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90343.1 Public Mus musculus 7 Zranb1 23 108 98 CCDS HistoryNCBI Gene:360216Re-query CCDS DB by CCDS ID:90343.1Re-query CCDS DB by GeneID:360216See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90343.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000215716.1 ENSMUSP00000148867.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215716.1Link to Ensembl Protein Viewer:ENSMUSP00000148867.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215716Re-query CCDS DB by Protein ID:ENSMUSP00000148867
Original member Current member NCBI NM_001362198.2 NP_001349127.1 Accepted alive Link to Nucleotide Sequence:NM_001362198.2Link to Protein Sequence:NP_001349127.1Re-query CCDS DB by Nucleotide ID:NM_001362198Re-query CCDS DB by Protein ID:NP_001349127Link to BLAST:NP_001349127.1
Original member Current member NCBI NM_001362199.2 NP_001349128.1 Accepted alive Link to Nucleotide Sequence:NM_001362199.2Link to Protein Sequence:NP_001349128.1Re-query CCDS DB by Nucleotide ID:NM_001362199Re-query CCDS DB by Protein ID:NP_001349128Link to BLAST:NP_001349128.1

Chromosomal Locations for CCDS 90343.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 132948168 132948208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132949585 132950435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132966507 132966694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132971186 132971339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132972690 132972761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132973425 132973623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132981281 132981401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132982371 132982500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132982683 132982912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132983733 132983951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGTGCAAGGTGGAGGTTATAGCATGGAAACTAAAATCTTACTTCCTGCCTGACATAACTCACTTCAAGA
AGTACACAATGTCAGAACATGGGATTAAGTGGGCCTGTGAATATTGTACGTATGAAAACTGGCCGTCTGC
AATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAACAATTATTACAGAAGATCCATTTAAAAGT
GGTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGTACTGAAGGTGGAAGTAGTCCTTTGATATGTC
CAGACTCTAGTGCAAGACCAAGGGTTAAGTCTTCATACAGCATGGAAAATGCAAATAAATGGTCATGCCA
CATGTGTACATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCGTAGGACCAGG
AGTCCCACAGAATCTCCTCAATCCTCAGGATCTGGTTCAAGACCAGTTGCTTTTTCTGTTGATCCTTGTG
AAGAATACAATGATAGAAATAAATTGAATACAAGGACCCAGCATTGGACTTGTTCTGTTTGCACATATGA
AAACTGGGCTAAGGCTAAAAAATGTGTTGTTTGTGACCATCCCAGACCTAATAACATTGAAGCAATAGAG
TTGGCAGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGGGGAGGCTGCA
GTAGTGGTAATAGCCAAAGAAGATCACCTCCAACTACAAAACGGGACTCGGAAGTGAAGATGGATTTTCA
GAGGATCGAATTGGCTGGTGCTGTTGGTACCAAGGAGGAACTTGAAGTGGACTTTAAAAAACTAAAGCAG
ATTAAAAATAGGATGAAAAAGACTGATTGGCTATTCCTCAATGCCTGTGTGGGTGTTGTGGAAGGTGACT
TAGCAGCCATAGAAGCATACAAGTCATCGGGAGGAGACATTGCACGCCAGCTTACTGCAGATGAAGTACG
CTTGCTGAACCGTCCTTCTGCTTTTGATGTTGGCTACACTCTGGTACATCTGGCCATACGCTTTCAGAGG
CAGGACATGTTAGCGATATTGCTTACAGAGGTATCTCAGCAAGCAGCAAAGTGTATTCCAGCCATGGTGT
GTCCTGAACTGACAGAGCAAATCCGGAGAGAAATAGCTGCTTCTCTTCACCAGAGAAAGGGGGATTTTGC
TTGCTATTTTCTGACTGACCTTGTAACATTTACATTACCAGCAGATATTGAAGATTTGCCTCCAACAGTT
CAAGAAAAATTATTTGATGAGGTGCTTGATAGAGATGTTCAAAAAGAGCTAGAGGAAGAATCTCCCATTA
TAAACTGGTCTTTGGAGTTGGCTACACGTCTGGACAGTAGACTATATGCACTTTGGAACCGGACTGCCGG
AGATTGTTTACTTGACTCAGTACTACAAGCTACATGGGGCATTTATGACAAAGACTCGGTGCTTCGGAAA
GCCCTGCATGACAGCCTGCATGACTGTTCACATTGGTTTTACACACGCTGGAAAGACTGGGAATCGTGGT
ATTCCCAGAGCTTTGGTTTACATTTTTCACTGAGGGAAGAACAATGGCAAGAAGACTGGGCATTCATACT
CTCTCTAGCTAGTCAGCCTGGAGCAAGTTTGGAACAGACACACATTTTTGTACTTGCACATATTCTTAGA
CGACCAATTATAGTTTATGGAGTAAAATATTATAAGAGTTTCCGGGGAGAAACTTTAGGATATACTCGGT
TTCAAGGAGTTTATCTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGGAAAAGTCCAATCGCACTGGGCTA
TACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTGCT
AATCTGAACACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAAGCTCCTCC
ATGTGCACTTCCTGTCTGCTCAGGAGCTAGGTAATGAGGAGCAGCAAGAGAAACTGCTCAGAGAGTGGCT
GGACTGCTGTGTGACTGAAGGGGGAGTTCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCC
TTGGTCACACAAATGGTAGAAAAATGGCTTGACCGCTACAGACAGATCCGGCCTTGTACATCCCTGTCTG
ATGGAGAGGAAGATGAGGATGATGAGGATGAATGA

Translation (734 aa):
MCKVEVIAWKLKSYFLPDITHFKKYTMSEHGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKS
GSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTR
SPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKKCVVCDHPRPNNIEAIE
LAETEEASSIINEQDRARWRGGCSSGNSQRRSPPTTKRDSEVKMDFQRIELAGAVGTKEELEVDFKKLKQ
IKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQR
QDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTV
QEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRK
ALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILR
RPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGA
NLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHP
LVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH