NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS90496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90496.1 Public Mus musculus 9 Maml2 23 108 98 CCDS HistoryNCBI Gene:270118Re-query CCDS DB by CCDS ID:90496.1Re-query CCDS DB by GeneID:270118See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90496.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159294.8 ENSMUSP00000124083.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159294.8Link to Ensembl Protein Viewer:ENSMUSP00000124083.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000159294Re-query CCDS DB by Protein ID:ENSMUSP00000124083
Original member NCBI NM_001013813.3 NP_001013835.2 Updated not alive Link to Nucleotide Sequence:NM_001013813.3Link to Protein Sequence:NP_001013835.2Re-query CCDS DB by Nucleotide ID:NM_001013813Re-query CCDS DB by Protein ID:NP_001013835
NCBI NM_001013813.4 NP_001013835.2 Updated not alive Link to Nucleotide Sequence:NM_001013813.4Link to Protein Sequence:NP_001013835.2Re-query CCDS DB by Nucleotide ID:NM_001013813Re-query CCDS DB by Protein ID:NP_001013835
Current member NCBI NM_001013813.5 NP_001013835.2 Accepted alive Link to Nucleotide Sequence:NM_001013813.5Link to Protein Sequence:NP_001013835.2Re-query CCDS DB by Nucleotide ID:NM_001013813Re-query CCDS DB by Protein ID:NP_001013835Link to BLAST:NP_001013835.2

Chromosomal Locations for CCDS 90496.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 13298064 13298561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 13619990 13621675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 13697174 13697377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 13702244 13702355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 13705592 13706604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3513 nt):
ATGGGGGACACAGCGCCCCCGCAGGCCCCCGCAGGAGGGTTGGGAGGGGCTTCTGGGGCGGGGCTCCTTG
GAGGGGGCTCAGTCACCCCGAGAGTGCACAGTGCTATTGTGGAACGCCTGCGGGCTCGCATTGCTGTCTG
CCGACAGCACCACCTGAGCTGTGAAGGACGCTATGAACGTGGTAGGGCTGAGAGCTCAGACCGAGAGAGG
GAGAGCACCATGCAGCTTCTCAGCCTGGTGCAGCATGGTCAGGGGGCAAGGAAGGCTAGCAAACATGCTA
AGGCTACAGTCGCGACTGCCACTACCACAGCTCCTCCACCGCCCCCTACTGCCCCTCCTGTGGCCTCCCA
AGCGGCAGCCACGGCCCCACCACCTCCACCAGACTATCACCATCACCATCAGCAGCACCGGCTGACCAGT
AATGATAACGGTGGGATAAACCGAGAGCAGCCGCCAGCTTCGACCCCGGGGGACCAGCGGAACTCAGCCC
TGCTTGCGCTCCAGGGCTCTTTGAAAAGAAAGCAAATAGTCAACTTGTCTCCTGCCAACAGCAAGAGGCC
CAATGGCTTTGTTGACAGCTCATTTCTTGACATCAAAAGGATCAGAGTTGGGGAGAACCTTTCTACAGGT
CAGGGGGGCCTCCCAGTAAATAATGGACAAAGTCAAATGATGCCAGGGCCCTTGACCATGAATCAAGCAC
CCCTGAGGAAGACTAATGCTCTACCACCTCCTGCACATTCCCCTGGCAACAATTTGTTTAACATGGGCTT
AAAGGAGGTGAAGAAAGAACCTGGGGAGACCCTGTCCTGCAGTAAGCACATGAGTGACCAAATGACACAA
GAGAGTGTTTTTACTAATAGGTTTGGAGATGACCCTGGAGATCAACTGATGGACCCTGAGCTACAGGAAC
TGTTCAATGAACTAACCAACATATCAGTGCCTCCCATGAGTGACCTGGAGCTGGAGAACATGATCAATGC
TACCATTAAGCAAGATGACCCGTTTGGCATTGACTTGGGTCAGCAGAGCCAGAGGAGCACACCTAGACCC
TCCCTGCCCATGGAGAAGATCATTATCAAAAGTGAATATTCACCTGGTTTGACACAAGGCACTTCAGGCT
CTCCCCAGCTGAGACCCCCATCAGCTGGCCCTGCATTTTCCTTGGCTAACTCTGCACTCTCCACTTCATC
CCCAATTCCCACAATTCCCCAGAGTCAGCCTCAGCTTCAGACAGTATCAGGAGCAAACAGGGCCCTGTCA
AGCTGGCAAGAAGTATCCCATGCTCAACAGCTCAAGCAGATAGCTGCAAACCGCCAGCAGCATGCACGGA
TGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCCATCTCCCAGCTGGCCAGCCTTGCAGTCCTCTGCTGG
GCCATCCCCAGGAGCATTTGTGCAGGAAAAAATCCCTAGCCCTTCCTTCAGCCAGCAACCATTCAGTCCA
CAGGGATCCCCCATGCCTGGGGTGACTGGCAGCAACACCCAGTCTAAAGCAGCGGCCAATTACACGTACA
AGGCCAGCCCCTCAGCCCAGGCTGGACACCTGGATGTGCTTCTGCAGCAAAAGCCTCAGGAGCTCAATCG
AAGCTTCATTAATAACCCACACCCAGCCTTGGAGCCCCGGCATGGCAATACCAAGCCTTTGTTCCATTTT
AACTCAGACCAAGCAAACCAGCAGATGCCTTCTCTTTTGCCTTCCCAGAGCAAACCTTCTCTCTTGCACT
ATACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCA
GCAACAGCAGCAGCAACAACAACAACAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAACAACAACAG
CAAGGCTCCCTGGCAGCTCAGCAGCAGCAGCAGCAGCCACAGCCACAGAGTTCATTGGTAGCTCAGCAGC
AGCAACAGCAGCAGCAACAGCAGCAGCAGCAGCAAGGTTCATTGACAGCTCAGCAGCAGCAGCAACAGCA
GCAGCAGCAGCAACCATCGCAACCCACCCATGCTTTATCAAGCCAGCCTTTGCTAAGGTCACCCTTACAA
CTTCAGCAAAAGATCATGCTTCAGAAAATGCAAACTCAGTCCATCACAGGCCTGGGATATCAAGTCACTC
AACAGCACAGACAGGATCAACACACTGTGGTAGGCCAGAACACAGGCCCCAGTCCAAGTCCCAACTCCTG
CTCAAATCCAAACACTGGAAGTGGTTACATGAACTCCCAGCAGTCCCTGTTGAATCAGCAGATGATGGGG
AAGAAACAGACCCTGCAGAGACCAACCATGGAGCAGAAGCAGCAACTTCTCCTCCAGCAGCAGATGCTGG
CTGATGCGGAGAAACTTTCCCCTCAGGATCAGATGAACAGACATCTGACAAGGCCGCCCCCAGACTACAA
AGACCAAAGAAGAAATACGGGCACCCTGCAGCCAGCTGCTCAGTATTCGGGTGGCTCCTCTACAGTGAGT
TTAAACTCTAACCAGGCTCTGACAAACCCAGTTTCAACACACACCATTTTAACTCCAAACTCCAGCCTCA
TGTCTACGTCTCATGGGATGAGAATGCCATTGTTATCTACAGTTCAGAACATAGGGATGTATGGAAACCT
GCCTTGTAACCAGCCTGGCACCTACAACGTCACTTCAACAATGAACCAGCTGACACAACAGAGAAATACA
ACTCAACTGATAACAAATCAGAACAACCCTCTGATGTCTCGGCCATCTCCCTTAGGGGCAAATAACGGTA
ACAATGTGGCCACCTTTGGAGCTGGATCTGCTGGCAGTTCACAGCAATTGAGACCAAATTTGGCTCACAG
TTTGTCAGGCATGTCAGCCCAGAGGTCATCAACTGTCATGATCACAGCCAACACGACAGCAACAAACTGG
GCTTCTCAAGAGGTGACAGGGAAACAACAGGAAGCCCTCAAATCCACAGGAGTCCGGTTCCCAACAAGTA
CACCTGCAGCCTATACCCCAAACCAGTCTTTGCAACCAGGAGTAGGGAGCCAGCCATTTTCCCAGAGGGC
AGTGGCACCCCCTAGCCAGTTATCGCCAGCAGTGCAAATGAGACCTATGAACCAAATGAATCAGGCATTA
AATGGGCAAACCCTGGGTTCACTCAGGGGGTTGAACCTCAGACCCAATCAGCTGGCCGCCCAGAGCCTGT
CTAATATGAACCCATCAGGGACAGGATTGAATCATCCCAGGACAGGCACCAACCAGCCTCCATCCCTGAC
ACCTAACGCTTTTCCTTCATCCAACCAAAGTTCCAGGGCTTTTCAAGGACCTGATCATGGCAGTGATTTA
GCTTTTGACTTCCTCAGCCAACAGAGCGACAGCATGTGCCCTGCCCTAAACAGTGATGCTGATTTCATCG
ATTCTTTATTGAAGACAGAGCCTGGTAATGACGACTGGATGAAAGATATCAACCTTGATGAGATCCTGGG
AAGCAATTCCTAA

Translation (1170 aa):
MGDTAPPQAPAGGLGGASGAGLLGGGSVTPRVHSAIVERLRARIAVCRQHHLSCEGRYERGRAESSDRER
ESTMQLLSLVQHGQGARKASKHAKATVATATTTAPPPPPTAPPVASQAAATAPPPPPDYHHHHQQHRLTS
NDNGGINREQPPASTPGDQRNSALLALQGSLKRKQIVNLSPANSKRPNGFVDSSFLDIKRIRVGENLSTG
QGGLPVNNGQSQMMPGPLTMNQAPLRKTNALPPPAHSPGNNLFNMGLKEVKKEPGETLSCSKHMSDQMTQ
ESVFTNRFGDDPGDQLMDPELQELFNELTNISVPPMSDLELENMINATIKQDDPFGIDLGQQSQRSTPRP
SLPMEKIIIKSEYSPGLTQGTSGSPQLRPPSAGPAFSLANSALSTSSPIPTIPQSQPQLQTVSGANRALS
SWQEVSHAQQLKQIAANRQQHARMQQQQQQQQQQPSPSWPALQSSAGPSPGAFVQEKIPSPSFSQQPFSP
QGSPMPGVTGSNTQSKAAANYTYKASPSAQAGHLDVLLQQKPQELNRSFINNPHPALEPRHGNTKPLFHF
NSDQANQQMPSLLPSQSKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QGSLAAQQQQQQPQPQSSLVAQQQQQQQQQQQQQQGSLTAQQQQQQQQQQQPSQPTHALSSQPLLRSPLQ
LQQKIMLQKMQTQSITGLGYQVTQQHRQDQHTVVGQNTGPSPSPNSCSNPNTGSGYMNSQQSLLNQQMMG
KKQTLQRPTMEQKQQLLLQQQMLADAEKLSPQDQMNRHLTRPPPDYKDQRRNTGTLQPAAQYSGGSSTVS
LNSNQALTNPVSTHTILTPNSSLMSTSHGMRMPLLSTVQNIGMYGNLPCNQPGTYNVTSTMNQLTQQRNT
TQLITNQNNPLMSRPSPLGANNGNNVATFGAGSAGSSQQLRPNLAHSLSGMSAQRSSTVMITANTTATNW
ASQEVTGKQQEALKSTGVRFPTSTPAAYTPNQSLQPGVGSQPFSQRAVAPPSQLSPAVQMRPMNQMNQAL
NGQTLGSLRGLNLRPNQLAAQSLSNMNPSGTGLNHPRTGTNQPPSLTPNAFPSSNQSSRAFQGPDHGSDL
AFDFLSQQSDSMCPALNSDADFIDSLLKTEPGNDDWMKDINLDEILGSNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH