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Report for CCDS9152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9152.1 Public Homo sapiens 12 PHETA1 24 110 108 CCDS HistoryNCBI Gene:144717Re-query CCDS DB by CCDS ID:9152.1Re-query CCDS DB by GeneID:144717See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000547838.2 ENSP00000447353.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547838.2Link to Ensembl Protein Viewer:ENSP00000447353.1Re-query CCDS DB by Nucleotide ID:ENST00000547838Re-query CCDS DB by Protein ID:ENSP00000447353
Original member Current member EBI ENST00000548163.1 ENSP00000449994.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548163.1Link to Ensembl Protein Viewer:ENSP00000449994.1Re-query CCDS DB by Nucleotide ID:ENST00000548163Re-query CCDS DB by Protein ID:ENSP00000449994
Original member Current member EBI ENST00000683047.1 ENSP00000507123.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683047.1Link to Ensembl Protein Viewer:ENSP00000507123.1Re-query CCDS DB by Nucleotide ID:ENST00000683047Re-query CCDS DB by Protein ID:ENSP00000507123
Original member Current member NCBI NM_001177997.3 NP_001171468.1 Accepted alive Link to Nucleotide Sequence:NM_001177997.3Link to Protein Sequence:NP_001171468.1Re-query CCDS DB by Nucleotide ID:NM_001177997Re-query CCDS DB by Protein ID:NP_001171468Link to BLAST:NP_001171468.1
Original member Current member NCBI NM_144671.6 NP_653272.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144671.6Link to Protein Sequence:NP_653272.2Re-query CCDS DB by Nucleotide ID:NM_144671Re-query CCDS DB by Protein ID:NP_653272Link to BLAST:NP_653272.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171468.1 249 Q8N4B1-1 249 100% 0 0
NP_653272.2 249 Q8N4B1-1 249 100% 0 0

Chromosomal Locations for CCDS 9152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 111362678 111363427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGAAGCTGAACGAGCGCAGCCTGGCCTTCTACGCCACCTGTGACGCCCCGGTGGACAATGCAGGCTTCC
TGTACAAGAAGGGTGGGCGGCACGCGGCCTACCACCGGCGCTGGTTCGTGCTGCGCGGGAACATGCTCTT
CTACTTCGAGGACGCTGCCAGCCGTGAGCCCGTGGGCGTCATCATCCTGGAGGGCTGCACTGTGGAGCTG
GTGGAGGCCGCCGAGGAGTTCGCCTTCGCTGTGCGCTTTGCGGGGACCCGGGCGCGCACCTACGTGCTGG
CCGCTGAGAGTCAGGATGCCATGGAGGGCTGGGTCAAGGCCCTGTCGCGTGCCAGCTTCGACTACCTGCG
GCTGGTGGTGCGCGAGCTGGAGCAGCAGCTGGCGGCTGTACGTGGCGGGGGTGGCATGGCCCTGCCCCAG
CCCCAGCCCCAGTCCCTGCCCTTGCCCCCGTCCCTGCCCTCTGCCCTGGCCCCAGTCCCATCCCTGCCTT
CTGCCCCAGCCCCGGTCCCAGCCCTGCCCCTGCCCCGCCGGCCCAGTGCCCTCCCGCCCAAGGAGAATGG
CTGCGCTGTCTGGAGCACTGAGGCCACCTTCAGGCCTGGACCCGAGCCCCCTCCACCACCGCCTCGCCGC
CGGGCCTCGGCACCCCACGGGCCCCTGGACATGGCCCCCTTCGCCCGGCTGCACGAGTGCTATGGCCAGG
AGATCCGGGCCCTGCGTGGCCAGTGGCTCAGCAGCCGGGTCCAGCCCTGA

Translation (249 aa):
MKLNERSLAFYATCDAPVDNAGFLYKKGGRHAAYHRRWFVLRGNMLFYFEDAASREPVGVIILEGCTVEL
VEAAEEFAFAVRFAGTRARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQLAAVRGGGGMALPQ
PQPQSLPLPPSLPSALAPVPSLPSAPAPVPALPLPRRPSALPPKENGCAVWSTEATFRPGPEPPPPPPRR
RASAPHGPLDMAPFARLHECYGQEIRALRGQWLSSRVQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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