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Report for CCDS92174.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92174.1 Public Homo sapiens 16 MATCAP1 24 110 108 CCDS HistoryNCBI Gene:653319Re-query CCDS DB by CCDS ID:92174.1Re-query CCDS DB by GeneID:653319See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92174.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561621.5 ENSP00000457099.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561621.5Link to Ensembl Protein Viewer:ENSP00000457099.1Re-query CCDS DB by Nucleotide ID:ENST00000561621Re-query CCDS DB by Protein ID:ENSP00000457099
Original member Current member NCBI NM_001369687.1 NP_001356616.1 Accepted alive Link to Nucleotide Sequence:NM_001369687.1Link to Protein Sequence:NP_001356616.1Re-query CCDS DB by Nucleotide ID:NM_001369687Re-query CCDS DB by Protein ID:NP_001356616Link to BLAST:NP_001356616.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356616.1 408 Q68EN5-2 408 100% 0 0

Chromosomal Locations for CCDS 92174.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67178024 67178097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67178199 67178504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67179430 67179562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67179815 67179958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67180041 67180610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGGTGCTGGACTCAGGGGCTCAGGCGTATGATCAGGCACCCCCCAGCCCGCCTACCAGTCCCCCATCCC
TGCGCCATAGGCTGAAGCCCTCAGACCGAGATGGGCCACCACTGTACCCCTGGTCTCAGTCCCTGGCCTT
GCCCCTGGCTCTGGCAGTCCCCCCAGCGCTGCAGCCCCAGCCTGAGCAGCAGCCGTTCTCACAGATGCTC
CTGGGCCACCGTGGCCACATGCGTCGCAGTGAGAGCACCTACTCTGTAAATAGTACTGGCCGGCGGGGGC
GTGGCACCCTGGGACGGCCTCCACCTGGACGGGGACGGAACCCAGGTGGGGGCACCCTGCGGCCTGCAGC
CTCCCTGCCTCACATTGCTAAGACTCAAAGGGATGCAGGCCATATTGCCAGCAAGAGCCCCTGCATGTTG
GTGGCCCTGCGGCCAACCAACATGGACCGTGAGCGAGACAAGTTCTTCCAGTCCCATTACACCTACAATC
CACAGTTTGAGTACCAGGAGCCCATGCCCACGGCTGTGCTGGAAAAGTACTGCGAGGCCTCTGGACAGTT
CATCCATCAGGCAGTTGGCATCATTGAGGCTGTTCTGGAGAAGTTTGGAACCTATGAACACTTTGAGGCT
GCCACTGGGGGGCAGCTGCTCACCAAGTGCCAGATATGGTCGATTGTGCGCAAATACATGCAGAAGGAGG
GCTGCGCTGGGGAGGTTGTGGTGCAGCTGAGTGAGGACCTGCTGTCCCAGGCAGTGATGATGGTGGAGAA
CAGCCGGCCCACATTGGCGATCAACCTGACCGGAGCCCGCCAGTACTGGTTGGAGGGCATGCTGCGGCAT
GAGATAGGCACCCACTACCTGCGGGGCGTGAACAACGCGCGCCAGCCGTGGCACAACGCGGAGGGCCGGC
TGCGGTACGGGCTGCGGCCGGCGAACCCCACGGAGGAGGGCCTGGCCAGCCTGCACAGCGTGCTGTTCCG
CAAGCAGCCGTTCCTGTGGCGCGCTGCACTGCTCTACTACACCATCCACCGCGCCGCGCGCATGTCCTTC
CGTCAGCTCTTCCAGGACCTGGAGCGCTACGTGCAGGACGCCGATGTGCGCTGGGAGTACTGCGTGCGCG
CCAAGCGCGGCCAGACCGACACCTCGCTGCCAGCAAGGACCAGGTGTACCTGGACGGCATCGTGCGCATT
CTGCGACATCGCCAGACCATCGATTTCCCGTTGCTGA

Translation (408 aa):
MVLDSGAQAYDQAPPSPPTSPPSLRHRLKPSDRDGPPLYPWSQSLALPLALAVPPALQPQPEQQPFSQML
LGHRGHMRRSESTYSVNSTGRRGRGTLGRPPPGRGRNPGGGTLRPAASLPHIAKTQRDAGHIASKSPCML
VALRPTNMDRERDKFFQSHYTYNPQFEYQEPMPTAVLEKYCEASGQFIHQAVGIIEAVLEKFGTYEHFEA
ATGGQLLTKCQIWSIVRKYMQKEGCAGEVVVQLSEDLLSQAVMMVENSRPTLAINLTGARQYWLEGMLRH
EIGTHYLRGVNNARQPWHNAEGRLRYGLRPANPTEEGLASLHSVLFRKQPFLWRAALLYYTIHRAARMSF
RQLFQDLERYVQDADVRWEYCVRAKRGQTDTSLPARTRCTWTASCAFCDIARPSISRC


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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