NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9430.1 Public Homo sapiens 13 DHRS12 24 110 108 CCDS HistoryNCBI Gene:79758Re-query CCDS DB by CCDS ID:9430.1Re-query CCDS DB by GeneID:79758See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 9430.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218981.5 ENSP00000218981.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000218981.5Link to Ensembl Protein Viewer:ENSP00000218981.1Re-query CCDS DB by Nucleotide ID:ENST00000218981Re-query CCDS DB by Protein ID:ENSP00000218981
Original member Current member NCBI NM_024705.2 NP_078981.1 Accepted alive Link to Nucleotide Sequence:NM_024705.2Link to Protein Sequence:NP_078981.1Re-query CCDS DB by Nucleotide ID:NM_024705Re-query CCDS DB by Protein ID:NP_078981Link to BLAST:NP_078981.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078981.1 242 A0PJE2-2 242 100% 0 0

Chromosomal Locations for CCDS 9430.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51769124 51769293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51771821 51771911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51773930 51774034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51777060 51777121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51790011 51790092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51791165 51791257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51799534 51799659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGAATCTGCATGTAAAGACTTTGTCCCTCATGACTTGGAGGTCCAGATTCCTGGAAGAGTCTTTTTGGT
CACTGGAGGAAACAGCGGCATTGGCAAAGCAACTGCCCTTGAAATCGCCAAGCGAGAACATTTTTCTGCA
CATTGTGGACTTGTCTGATCCCAAGCAAATCTGGAAATTTGTTGAAAATTTCAAGCAGGAACATAAACTC
CATGTTCTGATCAATAATGCAGGTTGCATGGTCAATAAAAGAGAGCTCACAGAAGATGGACTTGAAAAAA
ACTTTGCTGCCAATACTCTGGGTGTGTACATTCTCACGACCGGCCTGATCCCTGTGCTGGAGAAAGAACA
CGACCCCCGAGTGATAACCGTCTCCTCAGGAGGAATGTTGGTTCAGAAACTGAACACCAATGATCTCCAG
TCCGAAAGAACACCATTTGATGGAACTATGGTCTATGCACAAAACAAGAGGCAGCAAGTGGTTCTGACGG
AGCGGTGGGCCCAAGGGCACCCGGCCATCCATTTTTCTTCCATGCATCCTGGCTGGGCCGACACCCCAGG
TGTGAGGCAGGCGATGCCGGGGTTCCACGCCAGGTTCGGGGACCGCCTGCGCTCCGAGGCCCAGGGCGCG
GACACCATGCTGTGGCTGGCCCTCTCCTCTGCCGCAGCCGCACAGCCCAGCGGCCGCTTCTTTCAAGGTG
ACTTCCTCCCTGGCTGTGAAGGCAGCTGA

Translation (242 aa):
MNLHVKTLSLMTWRSRFLEESFWSLEETAALAKQLPLKSPSENIFLHIVDLSDPKQIWKFVENFKQEHKL
HVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQ
SERTPFDGTMVYAQNKRQQVVLTERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGA
DTMLWLALSSAAAAQPSGRFFQGDFLPGCEGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH