NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9672.1 Public Homo sapiens 14 MIA2 24 110 108 CCDS HistoryNCBI Gene:4253Re-query CCDS DB by CCDS ID:9672.1Re-query CCDS DB by GeneID:4253See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9672.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280082.4 ENSP00000280082.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000280082.4Link to Ensembl Protein Viewer:ENSP00000280082.3Re-query CCDS DB by Nucleotide ID:ENST00000280082Re-query CCDS DB by Protein ID:ENSP00000280082
Original member Current member NCBI NM_054024.4 NP_473365.3 Accepted alive Link to Nucleotide Sequence:NM_054024.4Link to Protein Sequence:NP_473365.3Re-query CCDS DB by Nucleotide ID:NM_054024Re-query CCDS DB by Protein ID:NP_473365Link to BLAST:NP_473365.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473365.3 654 Q96PC5-2 654 100% 0 0

Chromosomal Locations for CCDS 9672.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 39234115 39234229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39236922 39237055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39240561 39240647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39246911 39248141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39252748 39252966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39253071 39253249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1965 nt):
ATGGCAAAATTTGGCGTTCACAGAATCCTTCTTCTGGCTATTTCTCTGACAAAGTGTCTGGAGAGTACAA
AACTGCTGGCAGACCTTAAAAAATGTGGTGACTTGGAATGTGAAGCTTTAATAAACAGAGTCTCAGCCAT
GAGAGATTATAGAGGACCTGACTGCCGATACCTGAACTTCACTAAGGGAGAAGAGATATCTGTTTATGTT
AAACTTGCAGGAGAAAGGGAAGATTTGTGGGCAGGAAGTAAAGGAAAGGAGTTTGGATATTTTCCCAGAG
ATGCAGTCCAGATTGAAGAGGTGTTCATATCTGAGGAAATTCAGATGTCAACGAAAGAATCTGACTTTCT
TTGTCTTCTTGGAGTAAGTTACACATTTGACAATGAAGATAGTGAATTAAACGGTGATTATGGTGAAAAT
ATATATCCTTATGAAGAAGATAAAGATGAAAAATCTAGTATATATGAAAGTGATTTTCAGATAGAACCTG
GATTTTATGCAACTTATGAAAGTACTTTGTTTGAAGACCAAGTTCCAGCATTAGAGGCTCCTGAAGATAT
CGGAAGTACCAGTGAATCAAAAGACTGGGAAGAAGTAGTTGTTGAAAGTATGGAACAGGATCGTATTCCA
GAAGTGCATGTCCCACCATCTTCAGCTGTGTCTGGAGTCAAAGAATGGTTTGGATTGGGAGGAGAACAAG
CTGAAGAGAAGGCTTTTGAATCAGTTATTGAACCTGTACAAGAAAGCTCATTTCGGAGTAGAAAAATAGC
AGTGGAAGATGAGAATGACCTAGAGGAATTAAATAATGGTGAGCCTCAAACAGAACATCAGCAAGAATCT
GAATCAGAAATTGATTCAGTGCCAAAGACACAGTCTGAACTAGCATCTGAGTCAGAGCACATTCCCAAAC
CTCAATCCACTGGTTGGTTTGGTGGAGGATTTACAAGTTATTTAGGTTTTGGAGATGAGGATACAGGGCT
TGAATTAATAGCTGAAGAAAGCAATCCACCACTACAAGATTTTCCCAATTCCATATCATCTGATAAAGAA
GCCACAGTTCCATGTACAGAAATATTAACAGAAAAAAAAGACACAATCACTAATGATAGCTTGAGTCTCA
AGCCAAGTTGGTTTGATTTTGGTTTTGCTATACTAGGCTTTGCATATGCCAAGGAAGATAAAATTATGTT
AGATGACAGGAAAAATGAAGAAGATGGTGGGGCAGATGAACATGAACATCCTCTAACAAGTGAATTAGAC
CCTGAAAAAGAACAAGAAATAGAAACGATAAAAATTATAGAAACAGAAGATCAAATAGACAAGAAACCAG
TCTCAGAAAAAACAGACGAATCTGATACTATACCATATTTGAAAAAGTTCTTGTATAATTTTGACAACCC
TTGGAACTTCCAGAACATTCCAAAGGAAACAGAATTGCCATTTCCCAAACAGATACTGGATCAAAATAAT
GTAATTGAAAATGAAGAAACTGGAGAATTTTCCATTGATAATTATCCCACAGATAATACAAAAGTTATGA
TATTCAAAAGTTCATACAGTCTGTCAGATATGGTCTCTAACATAGAGTTACCTACGAGAATTCACGAAGA
AGTATATTTTGAACCCTCATCTTCTAAAGATAGTGATGAAAATTCGAAACCATCAGTAGACACCGAAGGG
CCTGCTCTGGTGGAGATAGACAGATCTGTGGAAAATACCCTGCTAAATAGTCAGATGGTTTCAACTGATA
ACTCTTTGTCTTCTCAAAATTATATTTCTCAGAAAGAAGATGCTTCTGAGTTTCAGATTCTGAAATACTT
ATTCCAAATTGATGTTTATGATTTCATGAATTCTGCATTTTCACCAATTGTAATTCTTACAGAAAGGGTA
AGTTTGCCTTTTAAACCTTTTGCAATAATTTTACCTATTTTGCTAAATATAAGAGTGGCTACAAAATATG
TTTGA

Translation (654 aa):
MAKFGVHRILLLAISLTKCLESTKLLADLKKCGDLECEALINRVSAMRDYRGPDCRYLNFTKGEEISVYV
KLAGEREDLWAGSKGKEFGYFPRDAVQIEEVFISEEIQMSTKESDFLCLLGVSYTFDNEDSELNGDYGEN
IYPYEEDKDEKSSIYESDFQIEPGFYATYESTLFEDQVPALEAPEDIGSTSESKDWEEVVVESMEQDRIP
EVHVPPSSAVSGVKEWFGLGGEQAEEKAFESVIEPVQESSFRSRKIAVEDENDLEELNNGEPQTEHQQES
ESEIDSVPKTQSELASESEHIPKPQSTGWFGGGFTSYLGFGDEDTGLELIAEESNPPLQDFPNSISSDKE
ATVPCTEILTEKKDTITNDSLSLKPSWFDFGFAILGFAYAKEDKIMLDDRKNEEDGGADEHEHPLTSELD
PEKEQEIETIKIIETEDQIDKKPVSEKTDESDTIPYLKKFLYNFDNPWNFQNIPKETELPFPKQILDQNN
VIENEETGEFSIDNYPTDNTKVMIFKSSYSLSDMVSNIELPTRIHEEVYFEPSSSKDSDENSKPSVDTEG
PALVEIDRSVENTLLNSQMVSTDNSLSSQNYISQKEDASEFQILKYLFQIDVYDFMNSAFSPIVILTERV
SLPFKPFAIILPILLNIRVATKYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH