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Report for CCDS49551.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49551.1 Public Mus musculus 14 Zfp957 23 108 98 CCDS HistoryNCBI Gene:105590Re-query CCDS DB by CCDS ID:49551.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49551.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040802.4 ENSMUSP00000039470.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040802.4Link to Ensembl Protein Viewer:ENSMUSP00000039470.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000040802Re-query CCDS DB by Protein ID:ENSMUSP00000039470
Original member Current member EBI ENSMUST00000161649.8 ENSMUSP00000124930.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161649.8Link to Ensembl Protein Viewer:ENSMUSP00000124930.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161649Re-query CCDS DB by Protein ID:ENSMUSP00000124930
Original member Current member NCBI NM_001033215.3 NP_001028387.1 Accepted alive Link to Nucleotide Sequence:NM_001033215.3Link to Protein Sequence:NP_001028387.1Re-query CCDS DB by Nucleotide ID:NM_001033215Re-query CCDS DB by Protein ID:NP_001028387Link to BLAST:NP_001028387.1

Chromosomal Locations for CCDS 49551.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 79212654 79214357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1704 nt):
ATGAATAAGCAAAAGAAACAGAAGCAGCAACCACCTCCACCTCCTCAGCCCCCTCAGATTCCAGAAAGTT
CTGCAGATGAAGAGCCAAAGCCAAAAAAGCGGAGGCAAAGGAGGGAGAGAAGGAAGCCTGGGGCCCGGCC
AAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAGCTAAAGTAC
GCTACCCAGCCACTAGGTAAAACCAATGCCAAAACCAAGTCTTTCCCCCCTTACATCCATGCAGTAAATA
AGGGTGAACTTGGAGCTGTTTGTACAATCGTCAATGCTGAAGAAGACGAAGAACAGATCAAATTGGTGAG
GAGCCGGAAGGGTCAGAGATCTCTGACCCCTCCCTATAGCAACACAGGAAGCAAAGTGCTCCCAGCTTCA
TCCTTTATGCTGCAGGGACCTGTGGTAACAGAATCTTCTGTAGTGGAGCCGGTGGTTTGCTGTCTCTGTG
GCAAGGGGGCCGGTTACGGTAACATGGGTGACCTCTTTGGACCCTTTTATCCCCAAAATTATCCAGCCAC
TCTTCCGAAGAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGT
GCTTCTAAGGGTTCTAAAACTGACACTGAGGAGGAGGAGCAACAGCAGCAGCAGAAGGAGCAGAGGAGCC
CGGCTGCTCATCCTAGGTTCAATCTGCGCCAGCGCTCCAAAGACTCTGCTGGAGGTCCTCGGTCCCTGTC
CAGGGGGCGCCCTCGTAAAAATGTAGCCTCTAAGGGCAACAGTAAAGAGACTGTTTTAGACACAAAGCCC
TCTGTACCTGCCTCATCAAAAGGTGGTCCTGAGCGGGGTGGAGGTCCTCGGTCCCTGTCCAGGGGGCGCC
CTCGTAAAAATGTAGCCTCTAAGGGCAACAGTAAAGAGACTGTTTTAGACACAAAGCCCTCTGTACCTAC
CACATCAAAAGGTGGTCCTGAGCGGGAGTGGAGTAGTCCTGAGCGGGGTGGAGGTCCTCGGTCCCTGTCC
AGGGGGCGCCCTCGTAAAAACGCAGCCGCTAAGGGCAGCAGTAAAAAGACTGTTTTAGACACAAAGCTCT
CTGTACCTACCACTTCAAAAGGTACTAATAGTTCAAAAACTGACACTCAGGAGCAACAGCAGCAGAAGGA
GCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAATCTGCGCCAGCGCTCCAAAGACTCTGCTGGAGGTCCT
CGGTCCCTGTCCAGGGGTCGCCCTCGTAAAAATGTAGCCCCTAAGGGCAACAGTAAAGAGACTGTTTTAG
ACACAAAGCCCTCTGTACCTACCACATCAAAAGGTGGTCCTGAGTGGGAGTTACAAATCCCTGAACGACC
TCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATGGAACCTACTTGGTCTAT
GGCAGGCTCTATGGCCTGCTGGAAGCGCTGGAAAACGCCAGAGATGTGACATGCTCCCACTGCCAGAAGG
CTGGCGCTACTCTGGGCTGCTACAACAAAGGCTGCACCTTCCGATACCATTACCCATGTGCCATTGATGC
AGATTGTTTGCTGAATGAGGAGAATTTCTCAGTGAGGTGCCCCAAGCACAAGGTGAGACTGCAGAGACGA
GAAGGTGGTGATGGACAAACATGA

Translation (567 aa):
MNKQKKQKQQPPPPPQPPQIPESSADEEPKPKKRRQRRERRKPGARPRKRKTKQAVPIVDPQEPEIKLKY
ATQPLGKTNAKTKSFPPYIHAVNKGELGAVCTIVNAEEDEEQIKLVRSRKGQRSLTPPYSNTGSKVLPAS
SFMLQGPVVTESSVVEPVVCCLCGKGAGYGNMGDLFGPFYPQNYPATLPKNPPPKRSTEMQSKVKVRHKS
ASKGSKTDTEEEEQQQQQKEQRSPAAHPRFNLRQRSKDSAGGPRSLSRGRPRKNVASKGNSKETVLDTKP
SVPASSKGGPERGGGPRSLSRGRPRKNVASKGNSKETVLDTKPSVPTTSKGGPEREWSSPERGGGPRSLS
RGRPRKNAAAKGSSKKTVLDTKLSVPTTSKGTNSSKTDTQEQQQQKEQRSLAAHPRFNLRQRSKDSAGGP
RSLSRGRPRKNVAPKGNSKETVLDTKPSVPTTSKGGPEWELQIPERPLPSNEFWVHEDCILWANGTYLVY
GRLYGLLEALENARDVTCSHCQKAGATLGCYNKGCTFRYHYPCAIDADCLLNEENFSVRCPKHKVRLQRR
EGGDGQT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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