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Report for CCDS8531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8531.1 Public Homo sapiens 12 AKAP3 24 110 108 CCDS HistoryNCBI Gene:10566Re-query CCDS DB by CCDS ID:8531.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228850.6 ENSP00000228850.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228850.6Link to Ensembl Protein Viewer:ENSP00000228850.1Re-query CCDS DB by Nucleotide ID:ENST00000228850Re-query CCDS DB by Protein ID:ENSP00000228850
Original member Current member EBI ENST00000545990.6 ENSP00000440994.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545990.6Link to Ensembl Protein Viewer:ENSP00000440994.1Re-query CCDS DB by Nucleotide ID:ENST00000545990Re-query CCDS DB by Protein ID:ENSP00000440994
Original member Current member NCBI NM_001278309.2 NP_001265238.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001278309.2Link to Protein Sequence:NP_001265238.2Re-query CCDS DB by Nucleotide ID:NM_001278309Re-query CCDS DB by Protein ID:NP_001265238Link to BLAST:NP_001265238.2
Original member Current member NCBI NM_006422.4 NP_006413.4 Accepted alive Link to Nucleotide Sequence:NM_006422.4Link to Protein Sequence:NP_006413.4Re-query CCDS DB by Nucleotide ID:NM_006422Re-query CCDS DB by Protein ID:NP_006413Link to BLAST:NP_006413.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265238.2 853 O75969 853 100% 0 0
NP_006413.4 853 O75969 853 100% 0 0

Chromosomal Locations for CCDS 8531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 4615739 4615894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4626496 4628805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4638101 4638196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2562 nt):
ATGTCAGAAAAGGTTGACTGGTTACAAAGCCAAAATGGAGTATGCAAAGTTGATGTCTATTCTCCTGGAG
ACAACCAAGCCCAGGACTGGAAAATGGACACCTCCACGGATCCTGTCAGAGTGCTCAGCTGGCTCCGCAG
AGACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAA
ACGTCCAACTCAGGAGACCCACACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTC
CAGAAAGATTGCATTTTGAGATGACTCACAAAGAGATTCCTTGCCAGGGCCCCAGGGCCCAACTTGGCAA
CGGGAGTTCAGTAGATGAAGTTTCCTTCTATGCTAACCGCCTCACGAATCTAGTCATAGCCATGGCCCGC
AAAGAGATCAATGAGAAGATCGATGGCTCTGAAAACAAATGTGTCTATCAGTCATTGTACATGGGGAATG
AACCCACACCCACCAAAAGCCTCAGTAAGATAGCATCAGAGCTTGTGAATGAGACCGTCTCTGCATGTTC
CAGGAATGCTGCCCCAGACAAGGCTCCTGGCTCTGGAGACAGAGTCTCGGGATCATCACAAAGTCCCCCA
AATTTGAAATACAAGTCCACTTTGAAGATCAAGGAGAGCACCAAAGAAAGACAGGGTCCAGATGACAAGC
CTCCTTCTAAGAAGTCTTTCTTCTATAAGGAAGTGTTTGAATCTCGTAATGGAGATTATGCCAGAGAGGG
TGGAAGGTTCTTTCCTCGGGAGAGAAAGAGGTTTCGAGGGCAGGAAAGGCCTGATGACTTTACGGCTTCT
GTTAGTGAAGGGATCATGACCTATGCTAACAGTGTGGTATCTGATATGATGGTCTCCATCATGAAGACAC
TGAAGATCCAAGTGAAAGACACAACCATTGCCACCATCCTACTGAAGAAGGTTCTGCTCAAGCATGCAAA
AGAGGTGGTCTCGGATCTCATCGACTCCTTCTTGAGGAATCTCCACAGCGTCACAGGGACCCTCATGACT
GACACACAGTTTGTCTCGGCTGTGAAAAGAACTGTCTTCTCTCATGGAAGCCAAAAGGCCACAGATATCA
TGGATGCCATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGC
CCAAGACAAGGCTGAGAGTTATTCCCTCATCTCCATGAAAGGAATGGGTGATCCTAAAAACCGAAATGTG
AACTTTGCCATGAAATCTGAAACTAAATTGAGAGAAAAAATGTATTCTGAACCCAAATCAGAGGAGGAGA
CTTGTGCGAAAACTCTGGGTGAGCACATTATCAAAGAGGGGCTTACCTTGTGGCATAAAACTCAGCAGAA
AGAATGTAAATCTCTAGGTTTCCAGCATGCAGCATTTGAAGCTCCCAACACACAGCGTAAGCCTGCATCA
GACATTTCCTTTGAGTACCCTGAAGATATTGGCAACCTCAGCCTTCCTCCATATCCTCCAGAGAAACCTG
AGAATTTTATGTATGATTCAGACTCCTGGGCCGAGGACCTGATCGTGTCTGCCCTGCTTCTGATTCAATA
TCACCTGGCCCAGGGAGGAAGAAGGGATGCACGGAGCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCT
GCCAATGAACCTCCTGTAGCTCCCGATGAATCTTGCCTTAAGTCTGCTCCCATTGTAGGTGACCAAGAAC
AAGCAGAAAAGAAGGACCTAAGGAGTGTTTTCTTTAATTTCATCCGGAACTTACTTAGTGAGACCATTTT
CAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAGGAAGTTGTGTGAA
AGACCGTTGGCGTCTTCTCCCCCCAGGCTATATGAGGATGATGAGACCCCTGGTGCCCTTTCTGGGCTGA
CCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGT
GATGAAGCTGTGTGTCATCATTGCTAAGTCCTGTGATGCTTCGTTGGCAGAGCTGGGAGATGACAAGTCT
GGAGATGCCAGTAGGCTAACTTCGGCCTTCCCAGATAGTTTATATGAGTGCTTACCAGCCAAGGGCACAG
GGTCAGCAGAAGCTGTCCTGCAGAATGCCTATCAAGCTATCCATAATGAAATGAGAGGCACATCAGGACA
GCCCCCTGAAGGGTGTGCAGCACCCACGGTGATTGTCAGCAATCACAACCTAACGGACACAGTTCAGAAC
AAGCAACTCCAAGCCGTCCTTCAATGGGTAGCTGCCTCTGAGCTCAATGTCCCTATTTTGTATTTTGCTG
GTGATGATGAAGGGATCCAGGAGAAGCTACTTCAGCTCTCAGCTGCTGCTGTGGACAAAGGATGCAGTGT
GGGCGAGGTTCTGCAGTCGGTGCTGCGCTATGAGAAGGAGCGCCAGCTGAATGAGGCGGTGGGGAATGTC
ACACCGCTGCAGCTGCTGGACTGGCTGATGGTGAACCTGTAA

Translation (853 aa):
MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKMDTSTDPVRVLSWLRRDLEKSTAEFQDVRFKPGESFGGE
TSNSGDPHKGFSVDYYNTTTKGTPERLHFEMTHKEIPCQGPRAQLGNGSSVDEVSFYANRLTNLVIAMAR
KEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVNETVSACSRNAAPDKAPGSGDRVSGSSQSPP
NLKYKSTLKIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDDFTAS
VSEGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMT
DTQFVSAVKRTVFSHGSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNV
NFAMKSETKLREKMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFEAPNTQRKPAS
DISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHLAQGGRRDARSFVEAAGTTNFP
ANEPPVAPDESCLKSAPIVGDQEQAEKKDLRSVFFNFIRNLLSETIFKRDQSPEPKVPEQPVKEDRKLCE
RPLASSPPRLYEDDETPGALSGLTKMAVSQIDGHMSGQMVEHLMNSVMKLCVIIAKSCDASLAELGDDKS
GDASRLTSAFPDSLYECLPAKGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTVIVSNHNLTDTVQN
KQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNV
TPLQLLDWLMVNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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