NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27374.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27374.1 Public Mus musculus 15 Ugt3a1 23 108 98 CCDS HistoryNCBI Gene:105887Re-query CCDS DB by CCDS ID:27374.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27374.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022861.8 ENSMUSP00000022861.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022861.8Link to Ensembl Protein Viewer:ENSMUSP00000022861.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022861Re-query CCDS DB by Protein ID:ENSMUSP00000022861
Original member Current member NCBI NM_207216.2 NP_997099.2 Accepted alive Link to Nucleotide Sequence:NM_207216.2Link to Protein Sequence:NP_997099.2Re-query CCDS DB by Nucleotide ID:NM_207216Re-query CCDS DB by Protein ID:NP_997099Link to BLAST:NP_997099.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997099.2 523 Q3UP75 523 100% 0 0

Chromosomal Locations for CCDS 27374.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 9279954 9280047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9284075 9284173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9291976 9292090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9306075 9306609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9310477 9310708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9311749 9311968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9314209 9314485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCTGCACATCGGAGTTGGCTTCTTGTGAGCTTCTTTCTCCTTGAGGTTCTTCTCTTGGAGGCTGCAA
AAATCCTGACTATATCTACACTGAGTGCCAGTCATTATATACTGATGAACCGTGTGTCGCAAATTCTGCA
AGGTGGTGGCCACGATGTAATCAAACTTCTTTATGAAGGTGGTGATATCCCAGATTTTAGAAAGGAAAAC
TCATCATACCAGGTTATTAATTGGCGTCTACCTGAAGATCAGCAAAAGACATTTGAAAATAGATGGCATC
GACTTATAGACGAATATGCTTATGGGAGGTCCAAATATCACACCCTACTAAAGATTCATCAATACTTTGC
GGACTTATGCAGTCACTTATTAAGCAGAAAGGACATCATGGAGTTATTACAAAAGGAGAACTTTGACCTA
GTACTTCTTGATTCAATGGATCTCTGTTCTTTCCTGATTGTTGAAAAGCTTGGGAAACGATTTGTGTCCT
TTCTTCCCTTTCAATTTAGCTATATGGACTTTGGGTTACCAAACGCCCCCTTGTCATATGCTCCAGTGTA
TGGTTCTGGTCTAACTGACCAAATGGACTTTTGGGGCCGAGTGAAGAACATTCTGATGTTCTTTCATTTC
ACCAAGAAGCGAAGGGACATCTTTTCTCAATATGGCAATACTGTCCAGGAGCATTTTGCGGAAGGCTCTC
AGCCAGTGTTGTCTGACCTTCTACTGAAAGCTGAGCTGTGGTTTGTCAACTCTGACTTTGCCTTGGATTT
TGCTCGTCCCCTGTTTCCCAACACAGTCTATGTGGGAGGTTTACTGGACAAACCTGTTCAGCCAATACCC
CAAGACTTGGAGGATTTTATCTCTCAGTTTGGAGACTCAGGTTTTGTCCTTGTGGCCCTGGGCTCTGTAG
TGAGCATGATTCAGTCCAAGGAAATTATTAAGGAGATGAACAGTGCCTTTGCTCACCTCCCTCAAGGGGT
GCTATGGACATGTAAGAGTTCTCATTGGCCCAAAGATGTCAGTTTGGCCCCAAATGTCAAAATCATGGAT
TGGCTTCCACAGATTGACCTTCTAGCTCACCCTAGCATTCGTCTGTTTGTCACCCATGGGGGGATGAACA
GTGTAATGGAGGCTGTCCATCATGGAGTACCAATGGTAGGGATTCCATTTTTTGGAGACCAACCTGAAAA
CATGGTCCGAGTAGAAGCAAAGAACCTTGGTGTTTCTATTCAGCTACAGACACTCAAGGCAGAGTCATTT
TTGCTCACCATGAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCA
GGCAATCCCACCCACTGACCCCTGCCCAGAGGCTTGTGGGCTGGATAGATCACATCTTGCAGACAGGGGG
TGCAGCACATCTCAAGCCATATGCTTTCCAGCAGCCATGGCATGAGCAGTACATGCTGGATGTCTTCCTC
TTTCTGTTAGGACTCACACTGGGTACCTTGTGGCTTAGTGTAAAGGTTCTTGTTGCTGTAACCAGGTATC
TGAGTATATCAAGGAAGGTCAAGCAGGCATAA

Translation (523 aa):
MAAHRSWLLVSFFLLEVLLLEAAKILTISTLSASHYILMNRVSQILQGGGHDVIKLLYEGGDIPDFRKEN
SSYQVINWRLPEDQQKTFENRWHRLIDEYAYGRSKYHTLLKIHQYFADLCSHLLSRKDIMELLQKENFDL
VLLDSMDLCSFLIVEKLGKRFVSFLPFQFSYMDFGLPNAPLSYAPVYGSGLTDQMDFWGRVKNILMFFHF
TKKRRDIFSQYGNTVQEHFAEGSQPVLSDLLLKAELWFVNSDFALDFARPLFPNTVYVGGLLDKPVQPIP
QDLEDFISQFGDSGFVLVALGSVVSMIQSKEIIKEMNSAFAHLPQGVLWTCKSSHWPKDVSLAPNVKIMD
WLPQIDLLAHPSIRLFVTHGGMNSVMEAVHHGVPMVGIPFFGDQPENMVRVEAKNLGVSIQLQTLKAESF
LLTMKEVIEDQRYKTAAMASKVIRQSHPLTPAQRLVGWIDHILQTGGAAHLKPYAFQQPWHEQYMLDVFL
FLLGLTLGTLWLSVKVLVAVTRYLSISRKVKQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH