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Report for CCDS46995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46995.1 Public Homo sapiens 4 CPLX1 24 110 108 CCDS HistoryNCBI Gene:10815Re-query CCDS DB by CCDS ID:46995.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304062.11 ENSP00000305613.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304062.11Link to Ensembl Protein Viewer:ENSP00000305613.6Re-query CCDS DB by Nucleotide ID:ENST00000304062Re-query CCDS DB by Protein ID:ENSP00000305613
Original member Current member NCBI NM_006651.4 NP_006642.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006651.4Link to Protein Sequence:NP_006642.1Re-query CCDS DB by Nucleotide ID:NM_006651Re-query CCDS DB by Protein ID:NP_006642Link to BLAST:NP_006642.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006642.1 134 O14810 134 100% 0 0

Chromosomal Locations for CCDS 46995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 786501 786698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 792433 792608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 824492 824522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGAGTTTGTGATGAAGCAGGCTCTAGGAGGGGCCACCAAGGACATGGGGAAGATGCTGGGGGGTGACG
AG
GAGAAGGACCCAGACGCCGCCAAGAAGGAGGAGGAGCGGCAGGAGGCGCTGCGCCAGGCGGAGGAGGA
G
CGCAAGGCCAAGTACGCCAAGATGGAGGCGGAGCGCGAGGCCGTGCGCCAGGGCATCCGAGACAAGTAC
GGC
ATCAAGAAGAAGGAGGAGCGCGAGGCCGAGGCCCAGGCCGCCATGGAGGCCAACTCCGAGGGGAGCT
TG
ACGCGGCCCAAGAAGGCCATCCCGCCGGGCTGCGGGGACGAGGTGGAGGAGGAGGACGAGAGCATCCT
G
GACACCGTCATCAAGTACCTGCCCGGGCCGCTGCAGGACATGCTCAAGAAGTAG


Translation (134 aa):
MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVRQGIRDKY
G
IKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEVEEEDESILDTVIKYLPGPLQDMLKK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser