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Report for CCDS13697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13697.1 Public Homo sapiens 21 HSF2BP 24 110 108 CCDS HistoryNCBI Gene:11077Re-query CCDS DB by CCDS ID:13697.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13697.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291560.7 ENSP00000291560.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291560.7Link to Ensembl Protein Viewer:ENSP00000291560.2Re-query CCDS DB by Nucleotide ID:ENST00000291560Re-query CCDS DB by Protein ID:ENSP00000291560
Original member Current member NCBI NM_007031.2 NP_008962.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007031.2Link to Protein Sequence:NP_008962.1Re-query CCDS DB by Nucleotide ID:NM_007031Re-query CCDS DB by Protein ID:NP_008962Link to BLAST:NP_008962.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008962.1 334 O75031-1 334 100% 0 0

Chromosomal Locations for CCDS 13697.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 43529754 43529962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43592225 43592328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43613830 43613947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43630322 43630454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43633272 43633421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43644289 43644392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43656587 43656737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 43658061 43658096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGGGCGAAGCGGGCGCCGCTGAGGAGGCCTGCCGGCACATGGGAACTAAAGAGGAATTTGTTAAAGTCA
GAAAGAAGGATCTGGAACGGCTGACAACTGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAA
TGGGGAGGTGCTGGAGAGCTTCCAGAAATTAAAGATTGTAGAAAAAAACCTGGAAAGGAAAGAGCAAGAA
TTAGAGCAGCTGAAAATGGATTGTGAGCACTTTAAAGCCCGCCTGGAAACCGTGCAGGCCGACAACATAA
GAGAGAAGAAGGAGAAACTGGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGC
AGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGGGGTGTCTCCAGCAGTGAGGAAGTC
GTCAAGGCCATTTTGGGAGGAGATAAAGCTTTGAAGTTTTTCAGCATCACTGGTCAAACAATGGAGAGTT
TTGTGAAGTCGTTAGACGGTGATGTCCAGGAGCTGGATTCGGATGAAAGTCAGTTTGTTTTCGCTCTGGC
TGGAATTGTCACGAATGTTGCTGCTATAGCATGTGGTCGTGAATTCTTGGTTAATTCAAGCCGGGTGCTC
TTGGACACCATATTGCAGCTTCTGGGAGACTTGAAGCCAGGACAGTGTACCAAACTCAAAGTGCTAATGC
TGATGTCCCTATACAATGTAAGCATCAATTTGAAAGGCTTGAAATACATCAGCGAGAGTCCAGGATTCAT
CCCTTTGCTGTGGTGGCTTTTGAGTGATCCAGATGCAGAGGTGTGCCTTCATGTACTGAGGCTTGTCCAG
TCTGTGGTTCTGGAACCTGAAGTCTTCTCCAAGTCGGCCTCTGAGTTCCGGAGCTCCCTGCCCCTGCAAC
GCATCCTGGCAATGTCCAAGAGCCGCAACCCCCGCCTGCAAACCGCAGCCCAGGAGCTCCTGGAAGATCT
CCGCACTCTGGAGCATAATGTGTAG

Translation (334 aa):
MGEAGAAEEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQE
LEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMGAAACTLLWGVSSSEEV
VKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDESQFVFALAGIVTNVAAIACGREFLVNSSRVL
LDTILQLLGDLKPGQCTKLKVLMLMSLYNVSINLKGLKYISESPGFIPLLWWLLSDPDAEVCLHVLRLVQ
SVVLEPEVFSKSASEFRSSLPLQRILAMSKSRNPRLQTAAQELLEDLRTLEHNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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