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Report for CCDS18491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18491.1 Public Mus musculus 4 Cyp4a14 23 108 98 CCDS HistoryNCBI Gene:13119Re-query CCDS DB by CCDS ID:18491.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18491.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030487.2 ENSMUSP00000030487.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030487.2Link to Ensembl Protein Viewer:ENSMUSP00000030487.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000030487Re-query CCDS DB by Protein ID:ENSMUSP00000030487
Original member Current member NCBI NM_007822.2 NP_031848.1 Accepted alive Link to Nucleotide Sequence:NM_007822.2Link to Protein Sequence:NP_031848.1Re-query CCDS DB by Nucleotide ID:NM_007822Re-query CCDS DB by Protein ID:NP_031848Link to BLAST:NP_031848.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031848.1 507 O35728 507 100% 0 0

Chromosomal Locations for CCDS 18491.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 115487143 115487311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115489789 115489865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115489962 115490026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115491066 115491199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115491287 115491477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115491561 115491667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115492081 115492235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115492610 115492734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115493575 115493702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115494169 115494213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115494886 115495018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115495919 115496113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGGTTTTTTTTTATTTAGCCCTACAAGGTACTTGGATGGTATCTCTGGGTTCTTCCAATGGGCCTTCT
TGCTCAGTCTATTTCTGGTGCTGTTCAAGGCAGTCCAATTCTACTTACGAAGGCAGTGGCTGCTCAAGAC
CCTCCAGCATTTCCCATGCATGCCTTCCCACTGGCTTTGGGGGCACCATCTGAAGGACAAGGAGCTCCAG
CAGATTCTTATATGGGTAGAGAAATTCCCAAGTGCCTGCTTACAGTGTCTCTCGGGGAGCAATATACGAG
TCCTGCTTTATGACCCTGACTATGTGAAGGTGGTTCTGGGGAGATCAGATCCAAAGGCTTCTGGAATTTA
TCAATTCTTTGCTCCCTGGATTGGTTATGGTTTGCTCCTGTTGAATGGGAAGAAGTGGTTCCAGCATCGG
CGGATGTTGACTCCAGCCTTCCACTATGATATCCTCAAACCCTATGTCAAAATCATGGCGGACTCTGTCA
ATATAATGCTAGATAAATGGGAGAAGCTTGATGGCCAGGACCACCCTCTGGAGATCTTCCACTGTGTTTC
ATTGATGACACTGGACACTGTTATGAAGTGTGCTTTCAGCTACCAAGGCAGTGTTCAGTTGGATGAAAAT
TCCAAGTTGTATACTAAGGCTGTCGAGGATCTAAACAACCTGACTTTCTTTCGCCTGCGGAATGCCTTTT
ATAAGTACAACATCATCTACAATATGTCCTCTGATGGACGTTTGTCCCACCATGCCTGCCAGATTGCTCA
CGAGCACACAGATGGAGTGATCAAGATGAGGAAGTCTCAGCTGCAGAATGAGGAAGAGCTGCAGAAGGCC
AGGAAGAAGAGACACTTGGATTTCTTGGACATCCTCTTGTTTGCCAGAATGGAGGATAGGAACAGCTTGT
CTGATGAGGACCTGCGTGCAGAGGTGGACACATTCATGTTTGAGGGTCATGACACTACAGCCAGTGGAAT
TTCCTGGATTTTCTATGCTCTGGCCACCCACCCTGAGCACCAACAGAGATGCAGAGAGGAGGTGCAGAGC
ATTCTGGGTGATGGAACCTCTGTCACATGGGACCATCTGGGCCAGATGCCCTACACCACCATGTGCATCA
AGGAGGCCCTGAGGCTCTATCCACCAGTAATATCTGTGAGTCGAGAGCTCAGCTCACCTGTCACCTTCCC
AGATGGACGCTCCATACCCAAAGGTATCACAGCCACAATTTCCATTTATGGCCTACATCATAACCCACGT
TTCTGGCCAAACCCAAAGGTGTTTGACCCCTCTAGATTTGCACCAGATTCTTCTCACCATAGCCATGCTT
ATCTGCCATTCTCAGGAGGATCAAGGAACTGCATTGGGAAACAGTTTGCTATGAACGAGCTGAAGGTGGC
TGTGGCCCTGACCCTGCTCCGCTTTGAATTGCTGCCAGATCCCACCAGGATCCCAGTCCCCATTGCAAGA
CTTGTGTTGAAGTCCAAGAATGGGATCCACCTGTGTCTCAAGAAGCTAAGATAA

Translation (507 aa):
MGFFLFSPTRYLDGISGFFQWAFLLSLFLVLFKAVQFYLRRQWLLKTLQHFPCMPSHWLWGHHLKDKELQ
QILIWVEKFPSACLQCLSGSNIRVLLYDPDYVKVVLGRSDPKASGIYQFFAPWIGYGLLLLNGKKWFQHR
RMLTPAFHYDILKPYVKIMADSVNIMLDKWEKLDGQDHPLEIFHCVSLMTLDTVMKCAFSYQGSVQLDEN
SKLYTKAVEDLNNLTFFRLRNAFYKYNIIYNMSSDGRLSHHACQIAHEHTDGVIKMRKSQLQNEEELQKA
RKKRHLDFLDILLFARMEDRNSLSDEDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQQRCREEVQS
ILGDGTSVTWDHLGQMPYTTMCIKEALRLYPPVISVSRELSSPVTFPDGRSIPKGITATISIYGLHHNPR
FWPNPKVFDPSRFAPDSSHHSHAYLPFSGGSRNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPIAR
LVLKSKNGIHLCLKKLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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