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Report for CCDS27147.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27147.1 Public Mus musculus 14 Gzmb 23 108 98 CCDS HistoryNCBI Gene:14939Re-query CCDS DB by CCDS ID:27147.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27147.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015581.5 ENSMUSP00000015581.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015581.5Link to Ensembl Protein Viewer:ENSMUSP00000015581.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000015581Re-query CCDS DB by Protein ID:ENSMUSP00000015581
Original member Current member NCBI NM_013542.3 NP_038570.1 Accepted alive Link to Nucleotide Sequence:NM_013542.3Link to Protein Sequence:NP_038570.1Re-query CCDS DB by Nucleotide ID:NM_013542Re-query CCDS DB by Protein ID:NP_038570Link to BLAST:NP_038570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038570.1 247 P04187 247 100% 0 0

Chromosomal Locations for CCDS 27147.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 56259419 56259562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56260182 56260442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56260579 56260714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56261087 56261234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56262095 56262149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGAAGATCCTCCTGCTACTGCTGACCTTGTCTCTGGCCTCCAGGACAAAGGCAGGGGAGATCATCGGGG
GACATGAAGTCAAGCCCCACTCTCGACCCTACATGGCCTTACTTTCGATCAAGGATCAGCAGCCTGAGGC
GATATGTGGGGGCTTCCTTATTCGAGAGGACTTTGTGCTGACTGCTGCTCACTGTGAAGGAAGTATAATA
AATGTCACTTTGGGGGCCCACAACATCAAAGAACAGGAGAAGACCCAGCAAGTCATCCCTATGGTAAAAT
GCATTCCCCACCCAGACTATAATCCTAAGACATTCTCCAATGACATCATGCTGCTAAAGCTGAAGAGTAA
GGCCAAGAGGACTAGAGCTGTGAGGCCCCTCAACCTGCCCAGGCGCAATGTCAATGTGAAGCCAGGAGAT
GTGTGCTATGTGGCTGGTTGGGGAAGGATGGCCCCAATGGGCAAATACTCAAACACGCTACAAGAGGTTG
AGCTGACAGTACAGAAGGATCGGGAGTGTGAGTCCTACTTTAAAAATCGTTACAACAAAACCAATCAGAT
ATGTGCGGGGGACCCAAAGACCAAACGTGCTTCCTTTCGGGGGGATTCTGGAGGCCCGCTTGTGTGTAAA
AAAGTGGCTGCAGGCATAGTTTCCTATGGATATAAGGATGGTTCACCTCCACGTGCTTTCACCAAAGTCT
CGAGTTTCTTATCCTGGATAAAGAAAACAATGAAAAGCAGCTAA

Translation (247 aa):
MKILLLLLTLSLASRTKAGEIIGGHEVKPHSRPYMALLSIKDQQPEAICGGFLIREDFVLTAAHCEGSII
NVTLGAHNIKEQEKTQQVIPMVKCIPHPDYNPKTFSNDIMLLKLKSKAKRTRAVRPLNLPRRNVNVKPGD
VCYVAGWGRMAPMGKYSNTLQEVELTVQKDRECESYFKNRYNKTNQICAGDPKTKRASFRGDSGGPLVCK
KVAAGIVSYGYKDGSPPRAFTKVSSFLSWIKKTMKSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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