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Report for CCDS37577.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37577.1 Public Mus musculus 17 H2-Oa 23 108 98 CCDS HistoryNCBI Gene:15001Re-query CCDS DB by CCDS ID:37577.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37577.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025192.7 ENSMUSP00000025192.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025192.7Link to Ensembl Protein Viewer:ENSMUSP00000025192.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000025192Re-query CCDS DB by Protein ID:ENSMUSP00000025192
Original member Current member NCBI NM_008206.2 NP_032232.2 Accepted alive Link to Nucleotide Sequence:NM_008206.2Link to Protein Sequence:NP_032232.2Re-query CCDS DB by Nucleotide ID:NM_008206Re-query CCDS DB by Protein ID:NP_032232Link to BLAST:NP_032232.2

Chromosomal Locations for CCDS 37577.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 34092447 34092528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 34093833 34094081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 34094308 34094589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 34094683 34094818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 34095003 34095006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (753 nt):
ATGGTCCTTTTTGTGGAGCTGGTCCCGGTACTCCTAACCGCAATGAGCTTCCTGAGTCCCCGAGGAGTAA
GGGCCATCAAGGCCGACCACATGGGCTCCTATGGACCGGCCTTCTACCAATCTTACGACGCTTCTGGACA
GTTCACACACGAATTTGACGGGGAACAAATTTTCTCCGTGGATCTGAAGAACGAGGAGGTCGTGTGGCGT
CTGCCTGAGTTTGGAGACTTCGCCCACTCGGACTTTCAGAGTGGGCTGATGAGCATTTCCATGATCAAAG
CTCATCTGGACATCTTGGTGGAACGCTCCAACCGAACCAGAGCTGTCAGCGTGCCTCCCAGAGTGACCGT
TCTCCCCAAGACTCGTGTGGAGCTCGGAAAGCCCAACGTCCTCATCTGCATCGTGGATGATATCTTCCCG
CCTGTGATCAATGTCACCTGGCTGCGCAACAGCCAGCCCATCACTAAGGGAGTGGCCCAGACCAGCTTCT
ACTCTCAGCCTAACCACAGGTTCCGGAAGTTCCACTACCTGACCTTCGTGCCCTCTGCGGAGGATGTGTA
CGACTGCAAGGTGGAACACTGGGGCCTGGATACACCGCTCCTCCAGCACTGGGAGCCCCAAGTGCTTACC
CCACCACCGGACACCATAGAGACCCTGATCTGTGGCCTGGGCCTGGTTCTCGGCCTTATGGGCTGCCTCC
TGGGCACCGTGCTCATGATCACAGGCACACGCAGGCCCAGTATCCGCAGGTAA

Translation (250 aa):
MVLFVELVPVLLTAMSFLSPRGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNEEVVWR
LPEFGDFAHSDFQSGLMSISMIKAHLDILVERSNRTRAVSVPPRVTVLPKTRVELGKPNVLICIVDDIFP
PVINVTWLRNSQPITKGVAQTSFYSQPNHRFRKFHYLTFVPSAEDVYDCKVEHWGLDTPLLQHWEPQVLT
PPPDTIETLICGLGLVLGLMGCLLGTVLMITGTRRPSIRR


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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