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Report for CCDS34526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34526.1 Public Homo sapiens 6 NKAIN2 24 110 108 CCDS HistoryNCBI Gene:154215Re-query CCDS DB by CCDS ID:34526.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34526.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368417.6 ENSP00000357402.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368417.6Link to Ensembl Protein Viewer:ENSP00000357402.1Re-query CCDS DB by Nucleotide ID:ENST00000368417Re-query CCDS DB by Protein ID:ENSP00000357402
Original member Current member NCBI NM_001040214.3 NP_001035304.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040214.3Link to Protein Sequence:NP_001035304.1Re-query CCDS DB by Nucleotide ID:NM_001040214Re-query CCDS DB by Protein ID:NP_001035304Link to BLAST:NP_001035304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035304.1 208 Q5VXU1-1 208 100% 0 0

Chromosomal Locations for CCDS 34526.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 123804201 123804254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124283005 124283142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124355267 124355347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124658186 124658386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124791339 124791399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124818387 124818468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 124823220 124823229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGGTTATTGCAGTGGCAGGTGCACGCTTATCTTTATCTGTGGCATGCAACTGGTTTGTGTGCTGGAGA
GGCAAATATTTGACTTCCTTGGATATCAGTGGGCACCTATCCTGGCAAATTTTGTACATATTATTATCGT
CATTCTTGGTTTGTTTGGAACTATTCAATATAGACCTCGTTACATAACAGGATATGCTGTCTGGCTAGTC
CTCTGGGTTACGTGGAATGTGTTTGTTATCTGCTTCTATTTGGAGGCTGGGGACCTCTCAAAGGAAACAG
ACCTTATCCTGACTTTTAATATATCAATGCACCGATCTTGGTGGATGGAGAATGGACCAGGATGTACGGT
GACGTCAGTGACACCTGCCCCAGACTGGGCCCCAGAAGACCATCGCTACATCACGGTCTCAGGGTGTTTG
CTGGAGTACCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGATTGTCCTCGCACTGGCAGGTTTCATCT
ACGCCTGTTATGTTGTGAAATGTATAACTGAAGAAGAGGACAGCTTTGATTTCATAGGTGGCTTTGACTC
TTATGGCTATCAAGGGCCTCAGAAGACATCTCATTTACAACTACAGCCTATGTACATGTCAAAATAA

Translation (208 aa):
MGYCSGRCTLIFICGMQLVCVLERQIFDFLGYQWAPILANFVHIIIVILGLFGTIQYRPRYITGYAVWLV
LWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCTVTSVTPAPDWAPEDHRYITVSGCL
LEYQYIEVAHSSLQIVLALAGFIYACYVVKCITEEEDSFDFIGGFDSYGYQGPQKTSHLQLQPMYMSK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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