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Report for CCDS2470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2470.1 Public Homo sapiens 2 DAW1 24 110 108 CCDS HistoryNCBI Gene:164781Re-query CCDS DB by CCDS ID:2470.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309931.3 ENSP00000311899.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309931.3Link to Ensembl Protein Viewer:ENSP00000311899.2Re-query CCDS DB by Nucleotide ID:ENST00000309931Re-query CCDS DB by Protein ID:ENSP00000311899
Original member Current member NCBI NM_178821.3 NP_849143.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178821.3Link to Protein Sequence:NP_849143.1Re-query CCDS DB by Nucleotide ID:NM_178821Re-query CCDS DB by Protein ID:NP_849143Link to BLAST:NP_849143.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_849143.1 415 Q8N136-1 415 100% 0 0

Chromosomal Locations for CCDS 2470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 227871690 227871729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227885351 227885423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227889856 227890000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227891255 227891313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227893795 227893917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227898182 227898281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227903002 227903109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227904929 227905035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227906236 227906338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227907138 227907252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227918780 227918856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227921399 227921561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 227923934 227923968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGAAGCTCAAGAGCCTCCTGCTCCGGTATTACCCGCCAGGAATTATGTTGGAATATGAAAAACATGGAG
AATTAAAGACTAAGTCCATAGATTTGCTTGATCTTGGTCCCAGCACTGATGTCAGTGCGTTAGTAGAAGA
AATCCAGAAGGCAGAACCTCTACTCACAGCTTCACGAACAGAGCAAGTCAAACTTTTGATACAGAGGTTG
CAAGAGAAACTCGGCCAGAACAGCAATCACACGTTCTATCTTTTTAAGGTTCTCAAAGCACATATATTGC
CACTGACTAATGTTGCACTTAACAAATCGGGCTCATGCTTTATCACAGGAAGCTATGATCGGACGTGCAA
GCTCTGGGACACTGCGTCTGGAGAGGAGCTGAACACGCTGGAGGGCCACAGGAATGTGGTTTATGCCATA
GCATTCAACAATCCTTACGGTGACAAAATCGCCACTGGGTCCTTTGATAAAACTTGTAAACTCTGGAGTG
TGGAAACAGGAAAATGTTACCATACCTTCAGGGGTCATACAGCAGAAATAGTGTGTTTATCATTTAACCC
TCAAAGCACATTGGTGGCGACTGGAAGTATGGACACAACAGCCAAATTGTGGGACATTCAGAATGGCGAG
GAAGTTTACACCTTAAGAGGACATTCTGCCGAAATCATCTCCTTGTCATTTAACACCTCAGGAGACAGAA
TCATCACGGGGTCTTTTGATCATACCGTTGTAGTGTGGGACGCTGATACTGGAAGGAAGGTAAATATCTT
AATTGGTCATTGTGCTGAGATTAGCAGTGCCTCATTCAATTGGGATTGCTCTCTAATATTAACTGGCTCT
ATGGACAAAACCTGCAAGCTGTGGGATGCTACAAATGGAAAATGTGTGGCAACCTTAACAGGCCATGATG
ATGAAATACTAGACAGCTGCTTTGATTACACTGGAAAGCTTATTGCAACTGCTTCAGCTGATGGAACAGC
AAGAATTTTCAGTGCTGCCACAAGAAAATGCATTGCCAAACTGGAAGGTCATGAAGGTGAAATTTCAAAG
ATTTCTTTCAACCCTCAAGGGAACCATCTTCTAACTGGCAGCTCTGACAAAACGGCTAGAATCTGGGATG
CTCAGACTGGCCAGTGCCTCCAGGTTCTTGAGGGGCACACTGATGAAATCTTTTCATGTGCTTTCAACTA
TAAAGGCAACATAGTCATTACAGGCAGCAAGGATAATACCTGTAGGATATGGCGTTGA

Translation (415 aa):
MKLKSLLLRYYPPGIMLEYEKHGELKTKSIDLLDLGPSTDVSALVEEIQKAEPLLTASRTEQVKLLIQRL
QEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAI
AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE
EVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGS
MDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISK
ISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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