NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27853.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27853.1 Public Mus musculus 15 Krt84 23 108 98 CCDS HistoryNCBI Gene:16680Re-query CCDS DB by CCDS ID:27853.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27853.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023720.7 ENSMUSP00000023720.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023720.7Link to Ensembl Protein Viewer:ENSMUSP00000023720.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023720Re-query CCDS DB by Protein ID:ENSMUSP00000023720
Original member Current member NCBI NM_008474.2 NP_032500.2 Accepted alive Link to Nucleotide Sequence:NM_008474.2Link to Protein Sequence:NP_032500.2Re-query CCDS DB by Nucleotide ID:NM_008474Re-query CCDS DB by Protein ID:NP_032500Link to BLAST:NP_032500.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032500.2 603 Q99M73 603 100% 0 0

Chromosomal Locations for CCDS 27853.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101525719 101526050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101527194 101527225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101527705 101527925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101528371 101528496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101528626 101528790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101529583 101529678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101530211 101530271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101530829 101531037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101532186 101532755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGTCTTGCCGCTCCTACAGAGTCAGCTCTGGCCGTCGGGTGGGAAGCTTCAGTTCTTGCTCAGCAATGG
CCCCTCAGCATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTGCAGGAGTGGGCCTGGCTTCCGGGGCTT
GGGTGGTTTTGGTAGTCGGAGCGTCATCAACTTTGGATCATCCTCACCCCGGATAGCAGTTGGATGCTCT
CGTCCTGTCCGCTGTGGAGTTGGCTTTGGAGCTGGCAGTGGGATGGCCTTTGGATCTGGTGATGGCCTGG
GCTTTAGGGCCAGCAGCGGTGTTGGCCTGGGGTTTGGGGCTGGCGGCTGCCCTAGCTATGGATTCGGAGG
CCCTGGATTCGGAGGCCCTGGCTTTGGTGGCCCTGGCTTTGGCTACAGAATCGGAGGAATTGGAGGCCCA
TCAGCCCCCGCTATCACAGCTGTAACTGTTAACCAGAGCCTGCTGACACCCCTCAACCTGGAGATTGACC
CCAATGCCCAGAGGGTGAAGAGAGACGAAAAGGAGCAGATCAAGACCCTCAACAACAAATTTGCCTCCTT
CATTGATAAGGTGAGGTTTCTGGAGCAACAGAATAAACTCCTAGAGACCAAGTGGAGCTTCCTCCAAGAA
CAGAAATGTGCCCGGAGCAATCTGGAGCCTCTCTTCGATAACTATATCACCAACCTGCGGAGGCAGCTGG
ATGTCCTAAGCAGTGACCAGGCTCGGCTGCAGGCAGAGAGGAACCACCTGCAAGACATCCTTGAGGGCTT
CAAGAAGAAGTATGAAGAGGAGGTGGTATTCCGGGCCAATGCCGAGAATGAGTTTGTAGCGCTGAAGAAG
GATGTAGATGCAGCTTTCCTGAACAAATCTGATCTGGAAGCCAATGTGGATACTCTGATCCAGGAAACTG
AATTCCTGAAGGCTCTCTACCATGAGGAAATCGAGATGCTGCAATCACACATATCAGAGACATCTGTCAT
CGTGAAGATGGACAACAGCCGGGATCTGAACCTAGATGGGATCATAGCTGAAGTCAAGGCACAGTATGAG
GAGGTGGCGAGGCGGAGTCGTGCAGATGTGGAGTCGTGGTACCAGACCAAGTATGAGGAGATGCGGGTGA
CCGCTGGCCAGCACTGTGACAATCTACGTAGCACACGGGACGAGATCAATGAACTGACCCGGTTGATCCA
GAGGCTGAAAGCAGAGATCGAGCATACCAAGGCTCAGTGTGCCAAACTGGAGGCTGCTGTGGCTGAGGCA
GAGCAGCAGGGTGAAGCAGCCCTCAATGATGCCAAGTGCAAGCTGGCTGATCTGGAGGGTGCCCTGCAGC
AGGCCAAGCAGGACATGGCCAGGCAGCTGCGGGAGTACCAGGAGCTCATGAATGTCAAGCTGGCCCTGGA
CATCGAGATTGTCACCTACAGGAGGCTGCTGGAGGGCGAGGAAATTCGGATCTGCGAAGGAGTTGGGCCA
GTAAACATATCTGTGAGCAGCTCTCGAGGAGGTGTGCTGTGTGGGCCCGAGTTAGTCTCTGGATCCAGCC
TTTCCCACAATGGTGGAGTCACCTTCTCCACCAGCAGCAGCATCCGTGCCACCGGAGGGGTTCTGGCTTC
CTCAAGCCTGAGGGCTGGTGGGGACCTGCTGAGCTCTGGGTCCAGAGGAGGCTCAGTGCTGGTGGGTGAT
GCCTGTGCCCCCAGCATCCCCTGTGCACTGCCCACTGAGGGAGGCTTCAGTAGCTGCAGTGGTGGTCGTG
GTAACAGGAGCTCCAGCGTCCGCTTCTCATCTACCACCACCTCCCGCAGGACCAGGTACTGA

Translation (603 aa):
MSCRSYRVSSGRRVGSFSSCSAMAPQHLNRFRSSSVSCRSGPGFRGLGGFGSRSVINFGSSSPRIAVGCS
RPVRCGVGFGAGSGMAFGSGDGLGFRASSGVGLGFGAGGCPSYGFGGPGFGGPGFGGPGFGYRIGGIGGP
SAPAITAVTVNQSLLTPLNLEIDPNAQRVKRDEKEQIKTLNNKFASFIDKVRFLEQQNKLLETKWSFLQE
QKCARSNLEPLFDNYITNLRRQLDVLSSDQARLQAERNHLQDILEGFKKKYEEEVVFRANAENEFVALKK
DVDAAFLNKSDLEANVDTLIQETEFLKALYHEEIEMLQSHISETSVIVKMDNSRDLNLDGIIAEVKAQYE
EVARRSRADVESWYQTKYEEMRVTAGQHCDNLRSTRDEINELTRLIQRLKAEIEHTKAQCAKLEAAVAEA
EQQGEAALNDAKCKLADLEGALQQAKQDMARQLREYQELMNVKLALDIEIVTYRRLLEGEEIRICEGVGP
VNISVSSSRGGVLCGPELVSGSSLSHNGGVTFSTSSSIRATGGVLASSSLRAGGDLLSSGSRGGSVLVGD
ACAPSIPCALPTEGGFSSCSGGRGNRSSSVRFSSTTTSRRTRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH