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Report for CCDS26933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26933.1 Public Mus musculus 14 Npy4r 23 108 98 CCDS HistoryNCBI Gene:19065Re-query CCDS DB by CCDS ID:26933.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26933.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052164.3 ENSMUSP00000056576.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052164.3Link to Ensembl Protein Viewer:ENSMUSP00000056576.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000052164Re-query CCDS DB by Protein ID:ENSMUSP00000056576
Original member Current member NCBI NM_008919.4 NP_032945.3 Accepted alive Link to Nucleotide Sequence:NM_008919.4Link to Protein Sequence:NP_032945.3Re-query CCDS DB by Nucleotide ID:NM_008919Re-query CCDS DB by Protein ID:NP_032945Link to BLAST:NP_032945.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032945.3 375 Q61041 375 100% 0 0

Chromosomal Locations for CCDS 26933.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 34146202 34147329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGAATACCTCTCATTTCTTGGCCCCTCTCTTCCCAGGATCCCTACAGGGTAAGAATGGGACCAATCCAT
TGGATTCCCCCTATAATTTCTCTGATGGCTGCCAGGATTCGGCAGAGCTGTTGGCCTTCATCATCACCAC
CTACAGCATTGAGACCATCTTGGGGGTCCTGGGAAACCTCTGCTTGATATTTGTGACCACAAGACAAAAG
GAAAAGTCCAATGTGACCAACCTACTCATTGCCAACCTGGCCTTCTCTGACTTCCTCATGTGCCTCATCT
GCCAACCACTCACAGTCACCTACACCATCATGGATTACTGGATCTTTGGTGAAGTCCTTTGCAAGATGTT
AACTTTCATCCAGTGTATGTCAGTGACAGTCTCCATCCTCTCACTGGTCCTTGTGGCCCTGGAGAGGCAC
CAGCTCATTATCAATCCAACAGGCTGGAAACCCAGTATTTTCCAGGCCTACCTGGGGATTGTGGTCATCT
GGTTCGTCTCTTGTTTCCTTTCCTTGCCGTTCCTGGCCAACAGCACCCTGAATGACCTCTTCCACTACAA
CCACTCTAAGGTTGTAGAGTTTCTGGAAGACAAGGTCGTCTGCTTTGTGTCCTGGTCTTCAGATCACCAC
CGTCTCATCTATACCACTTTTCTGCTGCTCTTTCAGTACTGCATCCCTCTAGCCTTCATCCTGGTCTGCT
ACATACGCATCTACCAGCGCCTGCAGAGGCAGAAGCATGTGTTCCATGCGCACGCTTGCAGCTCACGAGC
GGGACAGATGAAGCGGATCAACAGCATGCTCATGACAATGGTGACTGCCTTTGCAGTTCTCTGGCTACCC
CTGCATGTGTTCAACACTCTGGAGGACTGGTACCAGGAAGCCATCCCTGCTTGCCATGGCAACCTCATCT
TCTTGATGTGCCACCTGTTGGCCATGGCTTCCACCTGTGTCAACCCTTTCATCTATGGCTTTCTCAACAT
CAACTTCAAGAAGGATATCAAGGCTCTGGTGCTGACCTGCCATTGCAGGTCACCTCGAGGGGAGTCTGAG
CATCTGCCCCTGTCCACTGTTCACACGGACCTATCCAAGGGATCGATGAGGATGGGTAGCAAGTCTAACT
TCATATAG

Translation (375 aa):
MNTSHFLAPLFPGSLQGKNGTNPLDSPYNFSDGCQDSAELLAFIITTYSIETILGVLGNLCLIFVTTRQK
EKSNVTNLLIANLAFSDFLMCLICQPLTVTYTIMDYWIFGEVLCKMLTFIQCMSVTVSILSLVLVALERH
QLIINPTGWKPSIFQAYLGIVVIWFVSCFLSLPFLANSTLNDLFHYNHSKVVEFLEDKVVCFVSWSSDHH
RLIYTTFLLLFQYCIPLAFILVCYIRIYQRLQRQKHVFHAHACSSRAGQMKRINSMLMTMVTAFAVLWLP
LHVFNTLEDWYQEAIPACHGNLIFLMCHLLAMASTCVNPFIYGFLNINFKKDIKALVLTCHCRSPRGESE
HLPLSTVHTDLSKGSMRMGSKSNFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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