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Report for CCDS15347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15347.1 Public Mus musculus 1 Rgs2 23 108 98 CCDS HistoryNCBI Gene:19735Re-query CCDS DB by CCDS ID:15347.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15347.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000127206.7 ENSMUSP00000115558.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000127206.7Link to Ensembl Protein Viewer:ENSMUSP00000115558.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000127206Re-query CCDS DB by Protein ID:ENSMUSP00000115558
Original member Current member NCBI NM_009061.4 NP_033087.2 Accepted alive Link to Nucleotide Sequence:NM_009061.4Link to Protein Sequence:NP_033087.2Re-query CCDS DB by Nucleotide ID:NM_009061Re-query CCDS DB by Protein ID:NP_033087Link to BLAST:NP_033087.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033087.2 211 O08849 211 100% 0 0

Chromosomal Locations for CCDS 15347.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 144001680 144001874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144002116 144002282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144002780 144002841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144002952 144003053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 144004009 144004118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGCAAAGTGCCATGTTCCTGGCTGTCCAGCACGACTGCGTACCCATGGACAAGAGTGCAGGCAACGGCC
CCAAGGTCGAGGAGAAGCGGGAGAAAATGAAGCGGACACTCTTAAAGGATTGGAAGACCCGTTTGAGCTA
CTTCTTGCAGAATTCCTCTGCTCCTGGGAAGCCCAAAACTGGCAAGAAAAGCAAACAGCAAACTTTTATC
AAGCCTTCTCCTGAGGAAGCGCAGCTCTGGGCAGAAGCATTTGATGAACTGCTGGCCAGTAAATATGGGC
TGGCTGCATTCAGGGCGTTTTTAAAGTCCGAGTTCTGTGAAGAAAACATTGAATTCTGGTTGGCTTGTGA
AGACTTCAAAAAAACCAAATCACCCCAAAAACTGTCCTCAAAAGCAAGGAAAATCTATACCGACTTCATA
GAGAAGGAAGCTCCCAAAGAGATAAACATAGACTTCCAAACGAAATCTCTGATTGCCCAAAATATCCAAG
AGGCTACAAGTGGCTGCTTCACCACAGCTCAGAAGAGGGTGTACAGTTTGATGGAGAACAATTCTTATCC
TCGGTTCTTGGAGTCCGAATTCTACCAGGACTTATGTAAAAAGCCACAGATCACCACGGAGCCCCATGCT
ACATGA

Translation (211 aa):
MQSAMFLAVQHDCVPMDKSAGNGPKVEEKREKMKRTLLKDWKTRLSYFLQNSSAPGKPKTGKKSKQQTFI
KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFI
EKEAPKEINIDFQTKSLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQITTEPHA
T


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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