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Report for CCDS27845.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27845.1 Public Mus musculus 15 Ankrd33 23 108 98 CCDS HistoryNCBI Gene:208258Re-query CCDS DB by CCDS ID:27845.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27845.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070875.7 ENSMUSP00000067028.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070875.7Link to Ensembl Protein Viewer:ENSMUSP00000067028.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000070875Re-query CCDS DB by Protein ID:ENSMUSP00000067028
Original member Current member NCBI NM_144790.1 NP_659039.1 Accepted alive Link to Nucleotide Sequence:NM_144790.1Link to Protein Sequence:NP_659039.1Re-query CCDS DB by Nucleotide ID:NM_144790Re-query CCDS DB by Protein ID:NP_659039Link to BLAST:NP_659039.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659039.1 337 Q8BXP5-2 337 100% 0 0

Chromosomal Locations for CCDS 27845.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101115882 101115902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101116577 101116706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101116885 101117025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101119000 101119721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGAGACCCTAGAGTCCCAGACAGGCCTCATGGTTGCATGCTACCATGGCTTTGGTTCCATTGTGGCTC
TGCTCAGCTGCTGTCCTTTCCTGGATGTGAACCAGCAAGACAAAGACGGGAACACAGCCCTCATGCTGGC
TGCCCAAGCAGGTCACATGTCTCTTGTGACTCTCCTGCTCAACTACTTTGCTGGCCTGGACCTGGAACGC
AGGGACCAGCGGGGACTCACAGCTCTGATGAAGGCTGCCATTCAAGATCGCTCCGAGTGTGTAGTTGCCC
TCCTTATGGCAGGTGCTGACCTGAGCTCCGTGGATCCTGTCCGGGGCAAGACAGCCTTGGAATGGGCCGT
TCTGACCGACAGCTTTGACACTGCTCAGAAGATCCGGCAGCTGCTGAGGCGGCCCCAGGCGGAGCAGCTC
AGCCTGCATTACCAGCCAGAGTGGCCAGCCTTGGCTCAACTTGTGGCCCAGGCCCAGGCCCAGGCCCAGG
CTCCAGCTGCCCCATCCCTCCTAGAAAGGCTACAGGCTACTCTGAGCCTCTCTTTTGCTCAGTCTCCGCA
GGAAGGGGGTGTCCTGGACCACTTGGTGACTGTCACCACCAGCTTAGCCAGTCCCTTCCTGAGCACTGCC
TGCCACACACTGTGCCCTGATCACCCACCCAAGCTGGGCACTAGAGGCAAATCAGTGCCAGAACTTTTAG
GTACTGCCCCTCCGCCACCCCCAGAACCCCACCCTCCTCAGCAAGTCCCTGTCCCCCAGGTCTTTGCCCC
CAACCAAAGCCCTCAGAGTATGTTTTCCCAGTGGCTACAGTCCAGGGACAGCACCAGGTCCCAAGTCCCT
AAGATCCTCCTCTCTAAAGCACCCTCCCCTTCTGCACGGTATGAGCTGACACTCAGGCCTCAGGGGCAGC
AAAGTCTGGCTCCTCCAGTCTGGAGATTCCAGGAGAGGAAGAAGAAGGAGGAAGAAACAGAACCACGAGG
AGGTGGGCTGGGCCAAGCTGGAGGCAGCAAGTAA

Translation (337 aa):
METLESQTGLMVACYHGFGSIVALLSCCPFLDVNQQDKDGNTALMLAAQAGHMSLVTLLLNYFAGLDLER
RDQRGLTALMKAAIQDRSECVVALLMAGADLSSVDPVRGKTALEWAVLTDSFDTAQKIRQLLRRPQAEQL
SLHYQPEWPALAQLVAQAQAQAQAPAAPSLLERLQATLSLSFAQSPQEGGVLDHLVTVTTSLASPFLSTA
CHTLCPDHPPKLGTRGKSVPELLGTAPPPPPEPHPPQQVPVPQVFAPNQSPQSMFSQWLQSRDSTRSQVP
KILLSKAPSPSARYELTLRPQGQQSLAPPVWRFQERKKKEEETEPRGGGLGQAGGSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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