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Report for CCDS36589.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36589.2 Public Mus musculus 13 Dip2c 23 108 98 CCDS HistoryNCBI Gene:208440Re-query CCDS DB by CCDS ID:36589.2See the combined annotation on chromosome 13 in Sequence Viewer

Public Note for CCDS 36589.1
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript data.

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 36589.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000174552.7 ENSMUSP00000133806.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174552.7Link to Ensembl Protein Viewer:ENSMUSP00000133806.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174552Re-query CCDS DB by Protein ID:ENSMUSP00000133806
Original member Current member NCBI NM_001081426.2 NP_001074895.2 Accepted alive Link to Nucleotide Sequence:NM_001081426.2Link to Protein Sequence:NP_001074895.2Re-query CCDS DB by Nucleotide ID:NM_001081426Re-query CCDS DB by Protein ID:NP_001074895Link to BLAST:NP_001074895.2

Chromosomal Locations for CCDS 36589.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 9276982 9277066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9493105 9493176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9506579 9506689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9533252 9533377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9536656 9536865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9550184 9550318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9551746 9551865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9553274 9553471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9560671 9560762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9563114 9563224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9567831 9567954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9568301 9568410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9568591 9568693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9571050 9571114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9575134 9575227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9575362 9575481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9576804 9576918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9601357 9601496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9604489 9604625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9606323 9606531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9608944 9609058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9610697 9610898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9614347 9614456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9615745 9615825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9621879 9622002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9622582 9622703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9623757 9623868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9623958 9624067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9627973 9628103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9634722 9634890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9637095 9637265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9646979 9647040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9654603 9654660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9656637 9656711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9659245 9659419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9662137 9662260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 9665778 9666030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4671 nt):
ATGGCGGACCGCAGCCTGGAAGGCATGGCTCTCCCGTTGGAGGTGAGGGCCCGGCTGGCCGAGCTGGAGC
TGGAGCTGTCGGAAGGTGACATTACACAAAAGGGATATGAAAAGAAGAGGTCAAAATTAATTGGAGCCTA
CCTTCCCCAGCCTCCAAGAGTGGACCAAGCTCTGCCTCAAGAGCGACGGGCGCCTGTCACTCCTTCCTCA
GCTTCTCGATACCACCGCCGAAGGTCCTCAGGGTCTCGAGATGAACGTTATCGGTCAGATGTTCATACAG
AAGCTGTCCAGGCAGCTCTTGCTAAACACAAAGAAAGGAAAATGGCAGTACCTATGCCTTCCAAACGAAG
ATCCCTGGTTGTACAGACCTCCATGGATGCCTACACTCCCCCAGATACCTCTTCCGGTTCAGAAGATGAA
GGCTCAGTACAGGGTGATTCCCAGGGAACCCCCACTTCTAGCCAGGGCAGCATCAACATGGAGCATTGGA
TCAGCCAGGCCATCCATGGCTCTACCACATCAACAACCTCCTCCTCCTCCACGCAGAGTGGGGGCAGTGG
GGCAGCACACCGGCTGGCAGATGTCATGGCCCAGACACACATAGAAAATCATTCTGCACCTCCTGATGTA
ACCACCTACACCTCAGAACACTCAATACAAGTGGAAAGGCCGCAGGGCTCCACCACATCCCGGACAGCAC
CAAAGTATGGCAATGCTGAGCTCATGGAGACTGGGGATGGTGTACCAGTAAGTAGCCGGGTATCAGCAAA
AATTCAGCAGCTTGTCAATACCCTTAAACGACCGAAGCGGCCACCATTACGGGAATTCTTTGTTGATGAC
TTTGAAGAATTGTTAGAAGTTCAACAACCAGATCCAAACCAACCAAAGCCAGAGGGCGCCCAGATGCTGG
CCACAAGAGGGGAGCAGTTGGGAGTCGTCACAAACTGGCCACCCTCTTTAGAAGCTGCACTACAACGATG
GGGGACCATCTCCCCGAAGGCCCCCTGCCTGACCACCATGGACACAAATGGAAAGCCCCTGTACATCCTC
ACTTATGGCAAACTATGGACACGAAGTATGAAGGTTGCTTACAACATTCTACATAAACTAGGTACAAAGC
AAGAACCTATGGTACGGCCTGGAGACAGGGTGGCGCTAGTGTTCCCCAACAATGACCCTGCTGCTTTCAT
GGTGGCCTTCTATGGTTGCTTGCTGGCTGAAGTTGTTCCTGTCCCCATTGAAGTGCCACTCACAAGAAAG
GATGCAGGGAGCCAACAGATAGGTTTCTTGCTTGGAAGCTGTGGAGTAACTGTTGCCTTGACTAGTGATG
CCTGTCACAAAGGACTGCCAAAAAGCCCAACAGGAGAGATCCCACAGTTCAAAGGTTGGCCAAAGCTGCT
ATGGTTTGTCACAGAATCAAAACACCTCTCTAAACCTCCTCGGGATTGGTTTCCACACATCAAAGATGCA
AATAATGACACAGCTTATATTGAGTATAAGACGTGTAAAGATGGAAGTGTTCTTGGTGTGACCGTGACGA
GGATAGCGCTGCTGACACACTGTCAGGCACTCACACAGGCCTGCGGCTATACAGAAGCTGAAACCATTGT
GAATGTTCTAGACTTCAAGAAAGATGTGGGGCTCTGGCATGGCATATTGACAAGTGTCATGAACATGATG
CACGTCATCAGCATCCCATACTCGCTGATGAAGGTAAACCCCCTCTCCTGGATCCAGAAGGTCTGCCAGT
ATAAAGCAAAAGTGGCTTGTGTGAAATCAAGAGACATGCACTGGGCACTTGTAGCACACAGAGATCAGAG
AGATGTCAACCTGTCCTCGCTGCGCATGTTAATAGTGGCTGATGGAGCAAATCCCTGGTCTATTTCTTCT
TGTGATGCGTTTCTCAATGTCTTCCAGAGTAAAGGCCTTCGACAGGAGGTCATCTGTCCCTGTGCCAGCT
CACCAGAGGCCCTCACTGTGGCAATCCGGAGGCCCACAGATGACAGCAACCAGCCACCAGGACGAGGTGT
GCTATCCATGCATGGGCTGACCTATGGTGTGATACGTGTGGATTCAGAGGAGAAGCTGTCCGTGCTCACA
GTGCAGGATGTAGGCCTTGTTATGCCTGGAGCCATCATGTGTTCAGTGAAGCCAGATGGGATTCCTCAGT
TGTGCAGGACGGATGAAATCGGGGAGCTCTGTGTCTGTGCAGTTGCCACAGGAACATCATATTATGGTCT
CTCTGGCATGACCAAGAACACCTTTGAGGTATTTCCCATGACAAGCTCCGGGGCTCCGATCAGTGAATAC
CCATTCATAAGGACAGGTTTGCTGGGATTTGTTGGTCCTGGGGGCCTCGTCTTTGTTGTGGGTAAGATGG
ACGGCCTGATGGTAGTCAGTGGAAGAAGACACAATGCAGATGACATTGTGGCCACAGCCTTAGCTGTAGA
GCCCATGAAGTTTGTCTACAGAGGCAGGATAGCTGTGTTCTCAGTGACTGTCCTTCATGATGAAAGGATA
GTGATTGTGGCTGAGCAGAGGCCGGACTCCACAGAGGAAGACAGTTTCCAGTGGATGAGCAGAGTACTCC
AGGCAATTGACAGTATACATCAAGTTGGAGTTTATTGCCTGGCCTTGGTACCAGCAAATACCCTTCCCAA
AACCCCACTTGGTGGCATCCATTTGTCAGAAACAAAGCAGCTTTTCCTGGAGGGCTCCCTTCACCCCTGC
AATGTCCTGATGTGCCCACACACCTGTGTCACAAATTTACCGAAACCTCGGCAAAAGCAGCCAGAAATTG
GCCCTGCCTCAGTGATGGTGGGAAATCTAGTATCTGGGAAGAGGATTGCCCAGGCTAGCGGCAGAGACCT
GGGTCAGATAGAGGACAATGACCAGGCCCGGAAGTTCCTGTTCCTCTCAGAGGTCTTACAGTGGAGAGCA
CAGACCACTCCTGACCATCTGCTGTACACTCTGCTCAACTGTCGGGGAACAATAGCAAATTCCTTGACAT
GTGTTCAACTACACAAGCGTGCAGAAAAGATAGCAGTGATGCTGATGGAGAGGGGCCACCTGCAGGACGG
AGACCATGTGGCATTAGTCTACCCTCCAGGAATAGACCTTATCGCTGCATTTTATGGTTGCCTATATGCA
GGCTGTGTGCCAATTACCGTGCGACCTCCACATCCACAGAACATTGCAACGACATTGCCTACAGTCAAGA
TGATCGTAGAGGTGAGTCGATCTGCTTGTCTCATGACAACACAACTGATATGTAAACTGCTTCGGTCCAG
AGAGGCAGCAGCAGCTGTAGATGTCAGGACATGGCCCCTCATACTGGACACAGATGATTTGCCAAAGAAG
CGGCCTGCCCAGATCTACAAACCTTCCAACCCTGACACACTGGCTTACCTTGACTTTAGCGTGTCCACAA
CCGGGATGCTAGCTGGTGTAAAGATGTCTCATGCAGCCACCAGTGCCTTTTGCCGTTCTATTAAGCTGCA
GTGCGAGCTTTACCCTTCTAGAGAAGTGGCCATCTGCTTGGACCCTTACTGTGGACTTGGGTTTGTCCTC
TGGTGTCTCTGCAGTGTATACTCAGGACACCAGTCCATTCTGATCCCACCCTCTGAGCTGGAGACCAATC
CTGCCTTGTGGCTTCTTGCTGTGAGTCAATACAAAGTCCGGGATACCTTCTGTTCCTATTCGGTGATGGA
GCTTTGCACGAAAGGGCTGGGCTCACAAACTGAGTCCCTCAAGGCACGAGGCTTGGACTTGTCCCGGGTA
AGAACCTGTGTGGTTGTGGCAGAAGAGCGTCCCCGAATCGCCCTTACACAGTCTTTCTCAAAGCTCTTTA
AGGACTTGGGTCTCCACCCACGAGCTGTTAGTACTTCATTTGGCTGCAGAGTGAACCTGGCAATTTGCTT
ACAGGGGACATCAGGACCTGACCCCACCACTGTCTATGTTGACATGAGAGCCCTGAGACATGACAGAGTC
CGGTTGGTAGAAAGGGGATCTCCTCACAGCTTACCTCTGATGGAGTCTGGAAAAATACTTCCTGGGGTCC
GGATCATTATTGCCAATCCAGAAACAAAAGGCCCACTGGGGGACTCCCACCTTGGAGAGATCTGGGTTCA
CAGTGCCCACAATGCCAGTGGCTATTTTACCATTTATGGAGACGAATCTCTTCAGTCTGATCATTTCAAC
TCCCGGTTAAGTTTTGGAGACACCCAGACTATCTGGGCCCGAACTGGCTACCTGGGCTTTCTTCGGAGAA
CTGAGCTCACAGATGCAAATGGAGAGCGCCATGATGCCCTCTATGTAGTGGGGGCACTGGATGAAGCCAT
GGAACTGCGAGGCATGAGGTACCACCCAATAGACATAGAGACTTCAGTCATCAGAGCCCACAAAAGTGTC
ACAGAATGTGCTGTCTTTACCTGGACAAACCTGTTAGTGGTTGTGGTTGAACTTGATGGCTCAGAGCAGG
AAGCCTTGGACTTGGTTCCCTTGGTAACCAATGTGGTCCTGGAAGAGCATTACCTGATTGTAGGAGTAGT
GGTCGTGGTGGACATCGGGGTCATCCCCATCAACTCCCGGGGAGAGAAACAGCGGATGCACTTGCGAGAC
GGGTTCTTGGCAGACCAGCTGGACCCCATCTACGTGGCCTATAACATGTAG

Translation (1556 aa):
MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPRVDQALPQERRAPVTPSS
ASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDE
GSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDV
TTYTSEHSIQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDD
FEELLEVQQPDPNQPKPEGAQMLATRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYIL
TYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAAFMVAFYGCLLAEVVPVPIEVPLTRK
DAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA
NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMM
HVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDVNLSSLRMLIVADGANPWSISS
CDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLT
VQDVGLVMPGAIMCSVKPDGIPQLCRTDEIGELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEY
PFIRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERI
VIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC
NVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRA
QTTPDHLLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYA
GCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRTWPLILDTDDLPKK
RPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVL
WCLCSVYSGHQSILIPPSELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRV
RTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRV
RLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFN
SRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSV
TECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRD
GFLADQLDPIYVAYNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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