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Report for CCDS36832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36832.1 Public Mus musculus 14 Plac9 23 108 98 CCDS HistoryNCBI Gene:211623Re-query CCDS DB by CCDS ID:36832.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36832.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052286.15 ENSMUSP00000056665.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052286.15Link to Ensembl Protein Viewer:ENSMUSP00000056665.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000052286Re-query CCDS DB by Protein ID:ENSMUSP00000056665
Original member NCBI NM_207229.1 NP_997112.1 Updated not alive Link to Nucleotide Sequence:NM_207229.1Link to Protein Sequence:NP_997112.1Re-query CCDS DB by Nucleotide ID:NM_207229Re-query CCDS DB by Protein ID:NP_997112
NCBI NM_207229.2 NP_997112.1 Updated not alive Link to Nucleotide Sequence:NM_207229.2Link to Protein Sequence:NP_997112.1Re-query CCDS DB by Nucleotide ID:NM_207229Re-query CCDS DB by Protein ID:NP_997112
Current member NCBI NM_207229.3 NP_997112.1 Accepted alive Link to Nucleotide Sequence:NM_207229.3Link to Protein Sequence:NP_997112.1Re-query CCDS DB by Nucleotide ID:NM_207229Re-query CCDS DB by Protein ID:NP_997112Link to BLAST:NP_997112.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997112.1 108 Q8K262 108 100% 0 0

Chromosomal Locations for CCDS 36832.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 25888516 25888526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25888896 25889019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25890761 25890855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25902786 25902882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGCAGGCGCTGCTCTGCGCGCTAGCCGGGCTCGCCCTGCTCCGTGCCGGGACGGGCGAATGGGGCCAAG
GTCCCAGGGACACCCCCGGACGGCGAGCTGCCGAGTCCCCCAGTTCCCCTGGAGATCTAGCTGGGAGCCC
AGGCTGTGACAGACACGCGGCTGTGCAAAGGCGGTTAGACATTATGGAGGAGACGGTGGAGAAGACAGTG
GAGCACCTGGAGGCGGAAGTGACAGGTCTGCTGGGCCTGCTGGAGGAACTGGCTTCAAACCTTCCCACAG
GGCCCTTCAGCCCCAAACCTGACTTGCTTGGAGATGATGGTTTCTGA

Translation (108 aa):
MQALLCALAGLALLRAGTGEWGQGPRDTPGRRAAESPSSPGDLAGSPGCDRHAAVQRRLDIMEETVEKTV
EHLEAEVTGLLGLLEELASNLPTGPFSPKPDLLGDDGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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