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Report for CCDS23132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23132.1 Public Mus musculus 9 Tmprss13 23 108 98 CCDS HistoryNCBI Gene:214531Re-query CCDS DB by CCDS ID:23132.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23132.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034597.7 ENSMUSP00000034597.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034597.7Link to Ensembl Protein Viewer:ENSMUSP00000034597.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034597Re-query CCDS DB by Protein ID:ENSMUSP00000034597
Original member Current member NCBI NM_001013373.2 NP_001013391.2 Accepted alive Link to Nucleotide Sequence:NM_001013373.2Link to Protein Sequence:NP_001013391.2Re-query CCDS DB by Nucleotide ID:NM_001013373Re-query CCDS DB by Protein ID:NP_001013391Link to BLAST:NP_001013391.2

Chromosomal Locations for CCDS 23132.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 45319135 45319155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45328417 45328789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45329865 45329969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45332467 45332589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45333548 45333677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45336094 45336186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45337046 45337089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45338256 45338418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45339235 45339407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45343162 45343260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45344914 45345056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45345226 45345378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45345992 45346018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGGACAGAGGCAGCCACCGGAATTCTTCTCCAGCAAGGACACCTCCCCAGGCTTCCCCAGCAAGGACAT
CTCCAGCAAGGGCACCTCCTCAGGCCTCTCCAGCAAGGACACCTCCTCAGGCCTCTCCAACAAGGACACC
TCCTCAGGCCTCTCCAGCAAGGGCACCTCCTCCTCAGGCTTCCCCAGCCCGGGCATCTCCAGCCCGGGCA
TCTCTAGCCAGGGCACCACCTTCCAGGTCATCATCGGGCAGATCATCATCTGCCAGGTCAGCCTCCACGA
CATCCTCCCCAACGAGAGTGTACCTTGTTAGAGCAACACCAGTGGGGGCTGTCCCCATCCGGGCATCTCC
TGCCAGGTCAGCACCAGCCACCAGGGCCACCAGGGAGAGCCCAGGTCTCAGTTTCCCCAAGTTCTCCTGG
CAGGAGACCCAGAGGCAGCTGCCACTCATCGGGTGTGTCATCCTTCTCATCAGCCTGGTGATCTCACTCA
TCCTTCTCTTCTACTTCTGGAGAGGCCACACAGGGATCAAGTACAAAGAGCCACTGGAGAGTTGCCCTAT
CCACGCAGTTCGCTGTGATGGAGTGGTGGACTGCAAAATGAAGAGCGATGAGCTGGGCTGTGTCAGGTTC
GACTGGGACAAGTCCCTCCTGAAAGTCTACTCTGGGTCTTCTGGCGAGTGGCTTCCTGTCTGCAGCAGCA
GCTGGAACGACACTGACTCCAAGAGGACCTGCCAGCAGCTGGGATTTGACAGCGCTTACCGAACAACTGA
GGTAGCCCACAGGGACATCACCAGCAGCTTCTTACTCTCCGAATACAACACCACCATCCAGGAAAGCCTC
TATAGGTCGCAATGTCCTTCCCGGCGGTATGTCTCCCTCCAGTGTTCCCACTGTGGTTTGAGAGCTATGA
CCGGGCGGATCGTGGGAGGGGCTCTGACCTCGGAGAGCAAGTGGCCCTGGCAAGTTAGCCTGCACTTCGG
CACCACCCACATCTGTGGGGGCACACTCATCGATGCCCAGTGGGTGCTCACCGCTGCCCACTGTTTCTTT
GTGACCCGGGAGAAGCTGCTGGAGGGGTGGAAGGTGTATGCAGGCACCAGCAACTTGCACCAGCTGCCCG
AGGCTGCCTCTATCTCCCAGATCATCATCAACGGCAACTACACAGATGAACAGGATGACTATGACATTGC
CCTCATCAGGCTGTCCAAGCCCCTGACCCTGTCAGCTCACATCCACCCTGCCTGCCTCCCCATGCATGGT
CAGACCTTCGGCCTCAATGAGACCTGTTGGATCACGGGCTTTGGCAAAACCAAGGAGACAGATGAGAAGA
CATCTCCCTTCCTCCGAGAGGTTCAGGTCAACCTCATTGACTTCAAGAAGTGCAATGACTACTTGGTCTA
TGACAGCTACCTTACCCCAAGGATGATGTGTGCCGGGGATCTACGAGGAGGGAGGGACTCCTGCCAGGGA
GACAGTGGAGGACCTCTCGTCTGTGAGCAGAACAATCGCTGGTACCTGGCAGGTGTCACCAGCTGGGGCA
CAGGCTGTGGCCAGAAAAACAAGCCTGGTGTGTACACCAAAGTGACAGAAGTACTTCCCTGGATTTACAG
AAAGATGGAGAGTGAGGTACGATTCCGGAAATCTTAA

Translation (548 aa):
MDRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARA
SLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFPKFSW
QETQRQLPLIGCVILLISLVISLILLFYFWRGHTGIKYKEPLESCPIHAVRCDGVVDCKMKSDELGCVRF
DWDKSLLKVYSGSSGEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAHRDITSSFLLSEYNTTIQESL
YRSQCPSRRYVSLQCSHCGLRAMTGRIVGGALTSESKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFF
VTREKLLEGWKVYAGTSNLHQLPEAASISQIIINGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHG
QTFGLNETCWITGFGKTKETDEKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQG
DSGGPLVCEQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWIYRKMESEVRFRKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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