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Report for CCDS25885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25885.1 Public Mus musculus 12 Ankmy2 23 108 98 CCDS HistoryNCBI Gene:217473Re-query CCDS DB by CCDS ID:25885.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25885.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041640.4 ENSMUSP00000039484.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041640.4Link to Ensembl Protein Viewer:ENSMUSP00000039484.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000041640Re-query CCDS DB by Protein ID:ENSMUSP00000039484
Original member Current member NCBI NM_146033.3 NP_666145.3 Accepted alive Link to Nucleotide Sequence:NM_146033.3Link to Protein Sequence:NP_666145.3Re-query CCDS DB by Nucleotide ID:NM_146033Re-query CCDS DB by Protein ID:NP_666145Link to BLAST:NP_666145.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666145.3 440 Q3TPE9-1 440 100% 0 0

Chromosomal Locations for CCDS 25885.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 36157357 36157423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36165870 36165934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36170449 36170587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36176580 36176678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36182348 36182508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36186726 36186940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36187650 36187785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36193670 36193798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36194984 36195113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 36196220 36196401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1323 nt):
ATGGGTCACATAAAGAAAGGCGAGCTGACCCAGGAGGAAAAGGAACTGCTGGAAGTGATCGGGAAAGGTA
CTGTCCAAGAAGCCGGAAGACTGTTGTCTAGTAAGAATGTTCATGTCAACTGCTTGGATGAGAATGGAAT
GACTCCTTTGATGCATGCAGCCTATAAAGGGAAACTCGAGATGTGCAAGCTCCTCCTGCGCCATGGAGCT
GACGCCAGTTGCCATCAGCATGAGCACGGGTACACAGCCCTCATGTTTGCTGCGCTTTCCGGTAATAAAG
ACATCACTTGGGTCATGCTGGAAGCAGGCGCAGAGACCGATGTTGTGAACTCGGTGGGAAGAACTGCTGC
CCAGATGGCAGCCTTTGTGGGTCAGCACGATTGCGTGGCTATCATCAACAATTTCTTCCCTCGAGAGAGA
CTGGATTATTACACTAAACCCCAGGGACTGGATAAAGAGCCAAAACTGCCTCCAAAGTTGGCAGGCCCGC
TACACAAAATCATCACCACAACGAATCTCCACCCTGTCAAGATCGTGATGCTTGTGAGTGAGAACCCTCT
GCTGGCAGACGCAGCTGCTCTCGGTAAATGCTACAGGGTGATGGATTTGATCTGTGAGAAATGCATGAAA
CAGAGAGACATGAATGAAGTGTTGGCTATGAAAATGCACTACATCAGCTGCATCTTTCAGAAATGCATTA
CCTTCCTCAAAGAAGGAGAGAATAAGCTGGACACCCTGATCAGAAGCTTGTTGAAAGGCCGAGCGTCTGA
TGGCTTCCCGGTGTATCAGGAAAAGATCATCAGAGAAAGCATCCGGAAGTTTCCATACTGTGAAGCCACA
CTCCTACAGCAGCTGGTGCGAAGCATCGCTCCAGTTGAAATTGGTTCTGATCCCACTGCATTCTCTGTGC
TTACCCAAGCCATCACAGGGCAAGTGGGCTTTGTGGATGTTGAGTTTTGTACCACCTGTGGAGAAAAAGG
AGCGAGCAAAAGATGTTCGGTTTGTAAAATGGTAATATATTGTGACCAGACCTGCCAGAAGACACACTGG
TTCGCACATAAGAAGATGTGTAAGAGTCTGAAAGATGTCTATGAGAAGCAACAGATTGAAGCTGCCAAAC
ATAAGAGACAGGAGGAAAAGAATGGAAACCCCAATGTCAGTTCTAACCATGTCAATGAAGATCAACCAGA
AGCTGAAGAGGGCATCACTCAAGAAAATTCCATTCCTAGCGATTCTGTGGAAGGGGAGAAAGAAGCTGCT
AATGACACTGGACTGGCCAGTGCACAAGACGCTCCTACAGGGCCACAGTTGTCCGAGGAATAA

Translation (440 aa):
MGHIKKGELTQEEKELLEVIGKGTVQEAGRLLSSKNVHVNCLDENGMTPLMHAAYKGKLEMCKLLLRHGA
DASCHQHEHGYTALMFAALSGNKDITWVMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVAIINNFFPRER
LDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLVSENPLLADAAALGKCYRVMDLICEKCMK
QRDMNEVLAMKMHYISCIFQKCITFLKEGENKLDTLIRSLLKGRASDGFPVYQEKIIRESIRKFPYCEAT
LLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHW
FAHKKMCKSLKDVYEKQQIEAAKHKRQEEKNGNPNVSSNHVNEDQPEAEEGITQENSIPSDSVEGEKEAA
NDTGLASAQDAPTGPQLSEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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