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Report for CCDS18815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18815.1 Public Mus musculus 4 Wnt4 23 108 98 CCDS HistoryNCBI Gene:22417Re-query CCDS DB by CCDS ID:18815.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045747.4 ENSMUSP00000036580.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045747.4Link to Ensembl Protein Viewer:ENSMUSP00000036580.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000045747Re-query CCDS DB by Protein ID:ENSMUSP00000036580
Original member Current member NCBI NM_009523.2 NP_033549.1 Accepted alive Link to Nucleotide Sequence:NM_009523.2Link to Protein Sequence:NP_033549.1Re-query CCDS DB by Nucleotide ID:NM_009523Re-query CCDS DB by Protein ID:NP_033549Link to BLAST:NP_033549.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033549.1 351 P22724 351 100% 0 0

Chromosomal Locations for CCDS 18815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 137277680 137277756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137289114 137289349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137295441 137295572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137295660 137295802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137296312 137296779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGAGCCCCCGTTCGTGCCTGCGGTCCCTGCGACTCCTCGTCTTCGCCGTGTTCTCGGCCGCCGCGAGCA
AT
TGGCTGTACCTGGCCAAGCTGTCATCGGTGGGCAGCATCTCCGAAGAGGAGACGTGCGAGAAACTCAA
A
GGCCTGATCCAGAGGCAGGTGCAGATGTGCAAACGGAACCTTGAGGTGATGGACTCAGTGCGCCGTGGT
GCC
CAGCTGGCCATCGAGGAGTGCCAATACCAGTTCCGGAACCGGCGCTGGAACTGTTCCACACTGGACT
CC
CTCCCTGTCTTTGGGAAGGTGGTGACACAAGGGACCCGGGAGGCGGCCTTTGTATACGCCATCTCTTC
A
GCAGGTGTGGCCTTTGCAGTGACAAGGGCATGCAGCAGTGGAGAACTGGAGAAGTGTGGCTGTGACCGG
ACA
GTGCACGGGGTCAGCCCACAGGGCTTCCAGTGGTCAGGATGCTCGGACAACATCGCCTATGGCGTAG
CC
TTCTCACAGTCCTTTGTGGACGTCCGGGAGAGGAGCAAGGGGGCCTCCTCCAGCCGGGCACTCATGAA
T
CTTCACAACAACGAGGCTGGCAGGAAGGCCATCTTGACACACATGCGGGTGGAGTGCAAGTGTCACGGG
GTG
TCGGGCTCCTGCGAGGTAAAGACGTGCTGGCGTGCTGTACCGCCCTTCCGCCAGGTTGGCCACGCGC
TA
AAGGAGAAGTTTGACGGTGCCACGGAGGTGGAGCCACGACGCGTAGGCTCCTCCCGGGCGCTGGTGCC
T
CGGAATGCACAGTTCAAGCCACATACAGATGAGGACCTGGTATACCTGGAGCCTAGCCCGGACTTCTGT
GAG
CAGGACATCCGCAGTGGCGTGCTAGGCACGAGGGGCCGCACGTGCAACAAGACATCTAAAGCCATTG
AC
GGCTGCGAGCTACTGTGCTGTGGCCGCGGCTTCCACACAGCGCAAGTGGAGCTGGCCGAGCGCTGTGG
C
TGCAGGTTCCACTGGTGCTGCTTCGTCAAGTGCCGGCAGTGCCAGCGGCTCGTGGAGATGCACACGTGC
CGG
TGA


Translation (351 aa):
MSPRSCLRSLRLLVFAVFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRG
A
QLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQ
GTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDR
T
VHGVSPQ
GFQWSGCSDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHG
V
SGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPDFC
E
QDIRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAQVELAERCGCRFHWCCFVKCRQCQRLVEMHTC
R




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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