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Report for CCDS85546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85546.1 Public Mus musculus 8 Zfp930 23 108 98 CCDS HistoryNCBI Gene:234358Re-query CCDS DB by CCDS ID:85546.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85546.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000212681.1 ENSMUSP00000148587.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212681.1Link to Ensembl Protein Viewer:ENSMUSP00000148587.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212681Re-query CCDS DB by Protein ID:ENSMUSP00000148587
Original member NCBI NM_001013379.2 NP_001013397.2 Updated not alive Link to Nucleotide Sequence:NM_001013379.2Link to Protein Sequence:NP_001013397.2Re-query CCDS DB by Nucleotide ID:NM_001013379Re-query CCDS DB by Protein ID:NP_001013397
Current member NCBI NM_001013379.3 NP_001013397.2 Accepted alive Link to Nucleotide Sequence:NM_001013379.3Link to Protein Sequence:NP_001013397.2Re-query CCDS DB by Nucleotide ID:NM_001013379Re-query CCDS DB by Protein ID:NP_001013397Link to BLAST:NP_001013397.2

Chromosomal Locations for CCDS 85546.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 69209157 69209159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69226343 69226469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69226672 69226729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69227843 69228980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGGACGCACTGACATATGATGATGTCCACATTAATTTCACTCCGGAAGAGTGGGCCTTGCTGGATCATA
CCCAGAGGAATCTCTACACAGATGTCATGCTGGAGACCTACAAGAACCTCGTTGCTATAGGTTACAAACC
AGAAGACAAAATTATTGAACATCTTCAAAATTTTAGAATACCTGGAAGGCATAAAGGAAGTCTTACCAGA
GAGAAACCCTATGAATATACTCAATGTGGTAAAGCCTCTACACGTCACATTGGTCTTCAAAGGCATGAAA
GAATTCATACTGGAGAGAAACCTTATAAATGTAATCAATGTGGTAAAGCCTTTGTAGATTACTGTACTCT
TCAAAAACATGAACGAACACATACTGGAGAGAAAGCCTATGAATGTAATGAATGTGGTAAAGGCTTTACA
CAACAAGCTTACCTCCAAAACCATAAAAGAACACACACTGGAGAGAAACCCTACGAATGTTATGAATGTG
GTAAAGGATTTGCACATTACTCTACTCTTCGGAAACATGGTTCTACACATACTGGAGAGAAACCCTATGA
ATGTAATGAATGTGGTAAAGCCTTTGCACAACAGAGTCATCTCCAAAACCATAAAAGAACACATACTGGA
GAGAAACCCTATGAATGTAATGAGTGTGGTAAAGCCTTTTCACAACACAGTAGTCTCCAAAACCATAAAA
GAACACATACTGGAGAGAAACCCTATGAATGTAATGAATGTGGTAAAGCTTTTTCACAATACAGTAATCT
CCGAAAGCATAAAAGAACACATACTGGGGAGAAACCCTATGAATGTAATGAGTGTGGTAAAGCCTTTTCA
CAACATAGTAGTCTCCAACAACATAAAAGAACACATACTGGAGAGATACCTTATGAATGTAATGAATGTG
GTAAAGCCTTTTCACAACATAGTAGTCTCCAAATGCATAAAAGAACACATACTGGAGAGAAACCCTACGA
ATGCAAGCAATGTGGTAAAGCCTTTTCACAACACAGTAGTCTTCGAAAGCATAAGAGAACACATACTGGA
CAGAAGCCCTATGAATGTAGTCAATGTGGTAAAGCCTTTTCACGACACAGTAGTCTCCAACAACATAAAA
GAACACATACTGGAGAGAAACCTTATGAATGTAATGAGTGTGGTAAAGCCTTTACACAACAGGGTCATCT
CCAGAAACATAAAAGAACACATACTGGAGAGAAGCCCTATGAATGTAATCAGTGTGGTAAAGCCTTTTCG
GAACCCAGCAGTCTCCAAATGCATAAAAGAACACATAATGGAGAGAAACTCGATGTATGCAATTAA

Translation (441 aa):
MDALTYDDVHINFTPEEWALLDHTQRNLYTDVMLETYKNLVAIGYKPEDKIIEHLQNFRIPGRHKGSLTR
EKPYEYTQCGKASTRHIGLQRHERIHTGEKPYKCNQCGKAFVDYCTLQKHERTHTGEKAYECNECGKGFT
QQAYLQNHKRTHTGEKPYECYECGKGFAHYSTLRKHGSTHTGEKPYECNECGKAFAQQSHLQNHKRTHTG
EKPYECNECGKAFSQHSSLQNHKRTHTGEKPYECNECGKAFSQYSNLRKHKRTHTGEKPYECNECGKAFS
QHSSLQQHKRTHTGEIPYECNECGKAFSQHSSLQMHKRTHTGEKPYECKQCGKAFSQHSSLRKHKRTHTG
QKPYECSQCGKAFSRHSSLQQHKRTHTGEKPYECNECGKAFTQQGHLQKHKRTHTGEKPYECNQCGKAFS
EPSSLQMHKRTHNGEKLDVCN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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