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Report for CCDS52676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52676.1 Public Mus musculus 8 Tmem231 23 108 98 CCDS HistoryNCBI Gene:234740Re-query CCDS DB by CCDS ID:52676.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52676.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034429.8 ENSMUSP00000034429.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034429.8Link to Ensembl Protein Viewer:ENSMUSP00000034429.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034429Re-query CCDS DB by Protein ID:ENSMUSP00000034429
Original member Current member NCBI NM_001033321.2 NP_001028493.1 Accepted alive Link to Nucleotide Sequence:NM_001033321.2Link to Protein Sequence:NP_001028493.1Re-query CCDS DB by Nucleotide ID:NM_001033321Re-query CCDS DB by Protein ID:NP_001028493Link to BLAST:NP_001028493.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028493.1 315 Q3U284 315 100% 0 0

Chromosomal Locations for CCDS 52676.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 111913932 111914109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111914489 111914594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111915257 111915338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111918291 111918434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111918828 111918956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111933360 111933529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111933628 111933766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGCGCTGTACCATCTCTTCTCTCACCCAATCGAGCGCGCTTACCGCGCGGGGCTCTGCTCCAAGGCCG
CGCTCTTCCTGCTGTTGACCACCGCGCTCACCTACATCCCCCCGCTGCTGGTGGCCTTCCGGAGCCACGG
GTTTTGGCTGAAGCGGAGCAGCTACGAGGAGCAGCCGAACGTGCGCTTCCAGCACCAAGTGCTGCTCGTG
GCTCTCCTGGGGCCGGAGCCTGAAGCCTTCCTCGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGG
GGGCTCACCTGCGCGTCCCGCTCGTGTCGTCCAGAGAAGAAGACCGGAACCAGGATGGAAAAATGGATGT
GCTGTACTTTAAACTTGAACTTCCCCTGCAACCCACAGAGCATGTCCTCGGTGTGCAGCTAATCCTGACC
TTCTCCTACCAACTGCACAGGATGTCAACATTCGAGATGCAGAGCATGGCCTTTCTCCAGTCCTCCTTTG
CTGTCCCTGGGTCACAGTTATATGTGAATGGCGACCTGAGGCTGCAACAGAAGCAGCCACTGAGCTACCG
TGGCCTGGACATCAGATACAACGTGTCCGTGATCAATGGGACAAGTCCTTTTGCCCAGGACTACGACCTC
ACCCACATTGTTGCCGCCTATCAGGAAAGAAATGTTACCACTGTCCTCAGTGACCCCAACCCGATCTGGC
TGGTGGGCAGAGCCGCTGAAGCTCCGTTCGTGATCCATGCTGTCATCCGCTATCCCACGGAAGTCATTTC
TTACCAGCCAGGGTTCTGGGAGATGATCAAGTTCGCCTGGATCCAGTATGTCAGCATCCTGCTGATCTTC
CTCTGGGTGTTTGAAAGAATCAAAATCTTCGTGTTTCAGAACCAAGTAGTGACCTCTATCCCTGTAGCCG
TGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGA

Translation (315 aa):
MALYHLFSHPIERAYRAGLCSKAALFLLLTTALTYIPPLLVAFRSHGFWLKRSSYEEQPNVRFQHQVLLV
ALLGPEPEAFLAWSTFPTFNRLQGAHLRVPLVSSREEDRNQDGKMDVLYFKLELPLQPTEHVLGVQLILT
FSYQLHRMSTFEMQSMAFLQSSFAVPGSQLYVNGDLRLQQKQPLSYRGLDIRYNVSVINGTSPFAQDYDL
THIVAAYQERNVTTVLSDPNPIWLVGRAAEAPFVIHAVIRYPTEVISYQPGFWEMIKFAWIQYVSILLIF
LWVFERIKIFVFQNQVVTSIPVAVPQGEIRKEHLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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