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Report for CCDS37412.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37412.1 Public Mus musculus 16 Ets2 23 108 98 CCDS HistoryNCBI Gene:23872Re-query CCDS DB by CCDS ID:37412.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37412.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023612.16 ENSMUSP00000023612.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023612.16Link to Ensembl Protein Viewer:ENSMUSP00000023612.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000023612Re-query CCDS DB by Protein ID:ENSMUSP00000023612
Original member Current member NCBI NM_011809.3 NP_035939.3 Accepted alive Link to Nucleotide Sequence:NM_011809.3Link to Protein Sequence:NP_035939.3Re-query CCDS DB by Nucleotide ID:NM_011809Re-query CCDS DB by Protein ID:NP_035939Link to BLAST:NP_035939.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035939.3 468 P15037 468 100% 0 0

Chromosomal Locations for CCDS 37412.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 95706421 95706492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95709772 95709883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95711656 95711775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95712086 95712286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95714337 95714420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95714967 95715185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95716034 95716297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95717848 95717966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95718923 95719138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGAATGACTTTGGAATCAAGAACATGGACCAAGTGGCCCCTGTCGCCAACAGTTTTCGTGGGACACTCA
AGCGCCAGCCAGCCTTTGACACCTTCGATGGCTCTCTGTTTGCTGTGCTCCCTTCTCTCAGTGAAGATCA
GACACTCCAAGAAGTGCCCACGGGCCTGGATTCTGTCTCCCATGACTCGGCCAGCTGCGAGCTGCCTTTG
CTCACTCCCTGCAGCAAGGCAGTGATGAGCCAAGCCTTAAAAGCCACCTTCAGTGGCTTCCAAAAGGAGC
AACGACGTCTTGGCATCCCCAAAAACCCCTGGCTGTGGAGCGAGCAGCAGGTGTGCCAGTGGCTTCTCTG
GGCCACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGT
AACCTCGGCAAGGAGCGCTTCCTGGAGCTGGCGCCTGACTTTGTGGGTGACATCCTCTGGGAACATCTAG
AGCAGATGATCAAAGAGAACCAAGAAAAGACAGAAGACCAATATGAGGAAAACTCTCACCTCAACGCGGT
TCCTCATTGGATCAACAGCAATACATTAGGCTTCAGCATGGAACAGGCTCCATATGGAATGCAGGCACCA
AACTACCCCAAAGACAATCTCCTGGACAGCATGTGCCCGCCATCGGCCACGCCTGCAGCTCTGGGCTCTG
AGCTCCAGATGTTGCCCAAGTCTCGGCTCAACACCGTCAATGTCAATTACTGTTCCATCAGCCAGGACTT
CCCCAGCAGCAACGTGAATTTGCTCAACAACAATTCTGGAAAACCCAAGGACCACGACTCTCCAGAGAAC
GGTGGGGACAGCTTCGAGAGCTCCGACTCGCTGCTGAGGTCCTGGAACAGCCAGTCGTCCCTACTGGATG
TACAGCGGGTACCTTCCTTCGAGAGCTTTGAGGAGGACTGTAGCCAGTCTCTGTGCCTCAGTAAGCTGAC
CATGTCCTTCAAGGACTACATCCAAGAGAGGAGCGACCCAGTCGAGCAAGGCAAACCAGTTATTCCTGCA
GCAGTACTGGCTGGCTTCACTGGAAGCGGACCAATCCAGTTGTGGCAGTTTCTTCTGGAGCTACTCTCTG
ACAAGTCCTGTCAATCTTTCATCAGCTGGACGGGGGATGGATGGGAGTTCAAGCTTGCTGACCCCGATGA
GGTTGCCCGCCGGTGGGGGAAGAGGAAAAATAAACCAAAGATGAACTACGAGAAGCTGAGCCGGGGCTTA
CGTTACTACTACGACAAGAACATCATCCACAAGACTTCGGGCAAGCGCTACGTGTACCGTTTCGTATGTG
ACCTGCAGAACTTGCTGGGCTTCACTCCGGAGGAACTGCATGCCATCCTGGGCGTCCAGCCTGATACAGA
AGACTGA

Translation (468 aa):
MNDFGIKNMDQVAPVANSFRGTLKRQPAFDTFDGSLFAVLPSLSEDQTLQEVPTGLDSVSHDSASCELPL
LTPCSKAVMSQALKATFSGFQKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLHQFGMNGQMLC
NLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLNAVPHWINSNTLGFSMEQAPYGMQAP
NYPKDNLLDSMCPPSATPAALGSELQMLPKSRLNTVNVNYCSISQDFPSSNVNLLNNNSGKPKDHDSPEN
GGDSFESSDSLLRSWNSQSSLLDVQRVPSFESFEEDCSQSLCLSKLTMSFKDYIQERSDPVEQGKPVIPA
AVLAGFTGSGPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRGL
RYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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