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Report for CCDS10430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10430.1 Public Homo sapiens 16 TPSG1 24 110 108 CCDS HistoryNCBI Gene:25823Re-query CCDS DB by CCDS ID:10430.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10430.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000234798.5 ENSP00000234798.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000234798.5Link to Ensembl Protein Viewer:ENSP00000234798.4Re-query CCDS DB by Nucleotide ID:ENST00000234798Re-query CCDS DB by Protein ID:ENSP00000234798
Original member Current member NCBI NM_012467.4 NP_036599.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012467.4Link to Protein Sequence:NP_036599.4Re-query CCDS DB by Nucleotide ID:NM_012467Re-query CCDS DB by Protein ID:NP_036599Link to BLAST:NP_036599.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036599.4 321 Q9NRR2 321 100% 0 0

Chromosomal Locations for CCDS 10430.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1221788 1222096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1222196 1222341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1222652 1222917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1223423 1223594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1224602 1224628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1225207 1225252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGCCCTTGGGGCCTGTGGCCTCCTGCTGCTCCTGGCTGTGCCCGGTGTGTCCCTCAGGACTTTGCAGC
CAGGGTGTGGCCGGCCGCAGGTTTCGGATGCAGGCGGCCGGATCGTGGGGGGTCACGCTGCCCCGGCCGG
CGCATGGCCATGGCAGGCCAGCCTCCGCCTGCGGAGGGTGCACGTGTGCGGCGGGTCACTGCTCAGCCCC
CAGTGGGTGCTCACAGCTGCCCACTGCTTCTCCGGGTCCCTGAACTCATCCGACTACCAGGTGCACCTGG
GGGAACTGGAGATCACTCTGTCTCCCCACTTCTCCACCGTGAGGCAGATCATCCTGCACTCCAGCCCCTC
AGGACAGCCGGGGACCAGCGGGGACATCGCCCTGGTGGAGCTCAGTGTCCCCGTGACCCTCTCCAGCCGG
ATCCTGCCCGTCTGCCTCCCGGAGGCCTCAGATGACTTCTGCCCTGGGATCCGGTGCTGGGTGACCGGCT
GGGGCTATACGCGGGAGGGAGAGCCTCTGCCACCCCCGTACAGCCTGCGGGAGGTGAAAGTCTCCGTGGT
GGACACAGAGACCTGCCGCCGGGACTATCCCGGCCCCGGGGGCAGCATCCTTCAGCCCGACATGCTGTGT
GCCCGGGGCCCCGGGGATGCCTGCCAGGACGACTCCGGGGGGCCTCTGGTCTGCCAGGTGAACGGTGCCT
GGGTGCAGGCTGGCACTGTGAGCTGGGGTGAGGGCTGCGGCCGCCCCAACAGGCCGGGAGTCTACACTCG
TGTCCCTGCCTACGTGAACTGGATCCGCCGCCACATCACAGCATCAGGGGGCTCAGAGTCTGGGTACCCC
AGGCTCCCCCTCCTGGCTGGCTTCTTCCTCCCCGGCCTCTTCCTTCTGCTAGTCTCCTGTGTCCTGCTGG
CCAAGTGCCTGCTGCACCCATCTGCGGATGGTACTCCCTTCCCCGCCCCTGACTGA

Translation (321 aa):
MALGACGLLLLLAVPGVSLRTLQPGCGRPQVSDAGGRIVGGHAAPAGAWPWQASLRLRRVHVCGGSLLSP
QWVLTAAHCFSGSLNSSDYQVHLGELEITLSPHFSTVRQIILHSSPSGQPGTSGDIALVELSVPVTLSSR
ILPVCLPEASDDFCPGIRCWVTGWGYTREGEPLPPPYSLREVKVSVVDTETCRRDYPGPGGSILQPDMLC
ARGPGDACQDDSGGPLVCQVNGAWVQAGTVSWGEGCGRPNRPGVYTRVPAYVNWIRRHITASGGSESGYP
RLPLLAGFFLPGLFLLLVSCVLLAKCLLHPSADGTPFPAPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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