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Report for CCDS22597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22597.1 Public Mus musculus 8 Exoc3l 23 108 98 CCDS HistoryNCBI Gene:277978Re-query CCDS DB by CCDS ID:22597.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22597.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057855.3 ENSMUSP00000053766.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057855.3Link to Ensembl Protein Viewer:ENSMUSP00000053766.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000057855Re-query CCDS DB by Protein ID:ENSMUSP00000053766
Original member NCBI NM_177788.5 NP_808456.1 Updated not alive Link to Nucleotide Sequence:NM_177788.5Link to Protein Sequence:NP_808456.1Re-query CCDS DB by Nucleotide ID:NM_177788Re-query CCDS DB by Protein ID:NP_808456
Current member NCBI NM_177788.6 NP_808456.1 Accepted alive Link to Nucleotide Sequence:NM_177788.6Link to Protein Sequence:NP_808456.1Re-query CCDS DB by Nucleotide ID:NM_177788Re-query CCDS DB by Protein ID:NP_808456Link to BLAST:NP_808456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808456.1 739 Q8BI71 739 100% 0 0

Chromosomal Locations for CCDS 22597.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105289961 105290150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105290232 105290356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105290449 105290604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105290682 105290804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105290923 105291052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105292335 105292445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105292649 105292749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105292852 105292977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105293062 105293179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105293252 105293861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105294965 105295184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105295260 105295435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105295626 105295659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2220 nt):
ATGGACAGCAAGATACAGCCCACACTTCGTCCTGGATCTTCCTGCCCAAGGCCTGAGTGGCCAGAGCAGG
AGAGGGCCGAACAGCTGGCTCGGGGTGCAGCACTCAAGTGGGCTTCAGGCATCTTCTACCGGCCAGAGCA
GCTGACCAGGCTGGGCCAGTACCGAAGCCGTGAAATACAGCGTAACTATTCCCTGGAAGCAAGAATTAAG
TCAGTGGTGCAGTCCTACCTGGAAGGTGTGCAGACTGGTGTGTGGCAGCTGACCCGAGCCCTCGAGGCTG
TGCAGGGAACTCGTGAAGCTTTGAGCCAGGCCCATCACTTACTAAAGGGTTTGTCTCGGACCTCACAAAC
CCTGGAACCCCTGAGGGAATGTGTTGTCCAGCACAAACAACTTCAGATCCTGACTCGGTTGTTGCCAAGG
CTACAAGCAGTGCCGGCTACAGTGGCCCACACGCAGACCCTGATAGACTCTGAGCGACTCTTGGAGGCAT
ATGTGAGCCTGCGGGAACTAGAGCAGCTGAAAGAGGAGACACTGGCACCCCTAGGAGGTCTGGAGTTGCC
AATCTTCCAGGGGCTAGGCCTTCTGGCTGAGGCCCTAGGCCAAGCTGTGGAGGCGGCTGCAGGAGCTGCG
GGGCGGCTGGCACGAGAGGACCCAGCCCTGCTGGTAGCTGCTATTCGTGTGGCAGAGGTGGAGACTGAGC
GCACAATCCTGGGGCAGGCACCCCGAGACTGGCGGCAGCGATGTCTTCGGGCGCTACAGGAGGGCCTGGA
GCGGGTCCACTTTGCATCGCCTGTGCTTCCGGAGCCAGGGGCTCTGGCGGGGTGGCTTGAGGCTCTGCAG
GTAGCCTTGCCCGCCGAGTTGGCAACAGCGGAGGCATTGGTGGCACCCTGCTGCCCACCAAGCTACCGTG
TGGTTGAGCTATGGGCCCACACCCTGCACAGTGGCCTGCGCCGTAGCGTGCAGCAACTCCTCGCGGGGCC
CGAGCTAGGAGCTGCTGACACGTTTGCCTTGCTGCACTGGGCACTGCATGTGTACACGGGGAAGGAAATG
ATGGGGAACTTGGAACTGGGGCCTGAGGCTGATGTGTCCCAGCTAGAGCCCCTCTTGACCTCAGAGAACA
TTGAGCAGCTGGAGGCAGCCTTTGTGGCTCAGGTTCAGGTAAGTGTGGCTCAGTGGCTGAAGAAGGCACT
GGATGGAGAGGTAGCAGAGTGGAGCGGGGAACAGGAGCCCCCCACAGATCCATCCGGTTTCTACCACTCC
CCAATGCCAGCCATTGTCCTGCAGATCCTGGCTGAAAACATTCAAGTGACCAACCTGATTAGTGACTCAT
TGCATCGGCGGGCGCATAACATGGCAGTGTCAGAGCTGGGCGCATTCTTGAGAAGCTTCAGCGACGCTCT
GATCCGATTCTCTCGAGACCATCTCAGGGGAGACGCCGTGGCCCCTCACTATGTGCCCTACCTACTGTCT
GCCTTCAACCACCAATCAGCACTGAGATCTTCGGTCTCGGTCCTGCTGCCGGACGGGGAAGCTTCCGGGG
TCTTAGCTCCAGTGGAAGCTGCGCTGGACGACGTACAAAGGAGGATCTGCCGCCTGGTTTTGGAAGTACT
GCAGGTTGAGCTCCAGCCCCTGTTCTCCGCTCTGCCCTCGCGCCGGTGGCTATTGAGTTCTGAGTTGCTA
GATGGTGTGTGTGAGCAGACGTCGCACTTCTGCCAGGACTTCTGGCGCGTACGGAAGCCTGGTGTTCAGC
TGCTGCTGGCAGAGGCGGAACGAACCGTGGTGTTACAATACCTAAGGGCTCTGATGCAGGGCCGCCTAGT
GTGCCGCGGTACGGACGAGCGGAGCCAGGCGGCTGAGCGACTTCGGCAGGATGCTGCCCAGCTCAAAGAG
CTTTTCCTTGGTTTGGGCCTGGAAGAGAGCGCTCACTGCGCGCCCGTCCTGCTCGCGCTGAGGGAACTGC
TCAACCTCCACGACCCCACACTGCTTGGCCTCGAGGTGGCAGGCTTGAGGCAGCAATTTCCCGACGTGAG
CGAGGATCACGTCTCTGCCCTCTTGGACCTGCGCGGAGACGTGTCCCGAGAGCATCGTCAGGCAGCACTC
AGTTCGCTGCAGGCGGGTCCACCGCCCTCACCGTCCACTGGCCGCCGGGCGCTCTTCAGCCTGGTACCGA
CGCCTACGCCCTCCCTGTCCTCCTGCCTCCCTTCAGGTCCCTGCTCCTGA

Translation (739 aa):
MDSKIQPTLRPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREIQRNYSLEARIK
SVVQSYLEGVQTGVWQLTRALEAVQGTREALSQAHHLLKGLSRTSQTLEPLRECVVQHKQLQILTRLLPR
LQAVPATVAHTQTLIDSERLLEAYVSLRELEQLKEETLAPLGGLELPIFQGLGLLAEALGQAVEAAAGAA
GRLAREDPALLVAAIRVAEVETERTILGQAPRDWRQRCLRALQEGLERVHFASPVLPEPGALAGWLEALQ
VALPAELATAEALVAPCCPPSYRVVELWAHTLHSGLRRSVQQLLAGPELGAADTFALLHWALHVYTGKEM
MGNLELGPEADVSQLEPLLTSENIEQLEAAFVAQVQVSVAQWLKKALDGEVAEWSGEQEPPTDPSGFYHS
PMPAIVLQILAENIQVTNLISDSLHRRAHNMAVSELGAFLRSFSDALIRFSRDHLRGDAVAPHYVPYLLS
AFNHQSALRSSVSVLLPDGEASGVLAPVEAALDDVQRRICRLVLEVLQVELQPLFSALPSRRWLLSSELL
DGVCEQTSHFCQDFWRVRKPGVQLLLAEAERTVVLQYLRALMQGRLVCRGTDERSQAAERLRQDAAQLKE
LFLGLGLEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL
SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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