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Report for CCDS27590.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27590.1 Public Mus musculus 15 Lrrc24 23 108 98 CCDS HistoryNCBI Gene:378937Re-query CCDS DB by CCDS ID:27590.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27590.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049956.4 ENSMUSP00000061906.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049956.4Link to Ensembl Protein Viewer:ENSMUSP00000061906.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000049956Re-query CCDS DB by Protein ID:ENSMUSP00000061906
Original member Current member NCBI NM_198119.2 NP_932787.1 Accepted alive Link to Nucleotide Sequence:NM_198119.2Link to Protein Sequence:NP_932787.1Re-query CCDS DB by Nucleotide ID:NM_198119Re-query CCDS DB by Protein ID:NP_932787Link to BLAST:NP_932787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932787.1 521 Q8BHA1 521 100% 0 0

Chromosomal Locations for CCDS 27590.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76715372 76716306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76717923 76718091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76718222 76718500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76718652 76718834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGGCCCTAAGGGCCCCCACGCTGCTGCTGCTACTGCTGGGGTTATTGTTGCTGCCGCTGCTGCCTGGAC
TCCCACCCCGCGCCACTGGCTGTCCCGCCGCCTGCCGCTGCTACAGCGCCACAGTGGAGTGTGGCGCTCT
ACGGTTGCGCGTGGTCCCACCGGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATC
GCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTGCTGCCCTGCGCCACCTCTACCTGCACAACAATACCC
TGCGTGCGCTGGAGTCCGGTGCCTTCCGCGCACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAACCG
GCTTCGGGGATTGCGTGGCGGCGCATTTGTGGGCTTGGTCCAGCTTCGTGTGCTTTACCTGGCTGGAAAC
CAGCTGGCAAAGCTGCTGGATTTCACCTTCTTGCACCTGCCGCGACTACAGGAACTTCATCTTCAAGAAA
ACAGCATTGAATTACTGGAGGACCAGGCCCTGGCTGGGCTTTCCTCCTTAGCCCTACTGGACCTCAGCAG
GAACCAACTGGGCACCATCAGCAAGGAGGCCCTGCAGCCTCTGAGCAGCCTACAAGTGCTACGCCTCACA
GAGAACCCATGGCGTTGTGACTGTGCCCTTCACTGGCTGGGCTCTTGGATCAAAGAGGGGGGCCGACGGC
TTCTGAGCTCCAGAGACAAGAAGATCACATGTGCAGAGCCCCCACGCCTGGCGCTACAGAGTCTACTAGA
AGTATCTGGTGGTAGCCTCATCTGCATTCCCCCCTCTGTGAACGTGGAGCCCCCGGAGTTTACAGCTAAT
CTGGGGGAGGACCTGCAGGTCGCCTGTCAGGCATCAGGCTACCCACAGCCCCTGGTGGTCTGGAGAAAGG
TGCCCCAGCCTCGCGATGGTAAGCCTCAAGCCCAGGCCCAGCTGGAAGGTGGGGCGCCAGGCTTGGGCGG
GCACGGCACCCGAGATACTGGCAGCGGCATGCTCTTCCTCACCAACATCACACTGGCTCACGCAGGCAAG
TACGAATGCGAGGCCGCCAATGCAGGTGGCAAAGCTCGAGTGCCCTTTCATCTACTGGTCAACGCATCTC
GGCAGCAGTCACAGCAGCTACCTGACCCGCAAGCCCCAGCTACACGCCCTGTGGGACATGAACCCCAGCA
TGAGGCAGGTAGCATGGCTTTCCGAGCCCTGGGCCTAGCAACGCAGACAGCGATCACAGCAGCCATAGCG
CTGCTGGCGCTCACCGCGCTGTTGTTGGCAGCTATGATCTGCCGACGCCGACGCCGGCGGAAAAAGGTGC
CTGCGCCGTCGGGAGAAGGCACCCTATTTGTCAACGATTATTCGGATGGGCCTTGCACCTTTGCACAGCT
CGAGGAGCTCCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAG
GTACTGCCTGAGGAGGCCCCAGAACACAATCCTCCCGATGGGCTCAAGTCTGGGCTACGCCTCCCTACAC
GTGTGGCCTATGAGATCCATTGCTGA

Translation (521 aa):
MALRAPTLLLLLLGLLLLPLLPGLPPRATGCPAACRCYSATVECGALRLRVVPPGIPPGTQTLFLQDNSI
AHLEQGSLAPLAALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGN
QLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQPLSSLQVLRLT
ENPWRCDCALHWLGSWIKEGGRRLLSSRDKKITCAEPPRLALQSLLEVSGGSLICIPPSVNVEPPEFTAN
LGEDLQVACQASGYPQPLVVWRKVPQPRDGKPQAQAQLEGGAPGLGGHGTRDTGSGMLFLTNITLAHAGK
YECEAANAGGKARVPFHLLVNASRQQSQQLPDPQAPATRPVGHEPQHEAGSMAFRALGLATQTAITAAIA
LLALTALLLAAMICRRRRRRKKVPAPSGEGTLFVNDYSDGPCTFAQLEELRDDHGHEMFVIDRSKPLFPE
VLPEEAPEHNPPDGLKSGLRLPTRVAYEIHC


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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