NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8823.1 Public Homo sapiens 12 KRT83 24 110 108 CCDS HistoryNCBI Gene:3889Re-query CCDS DB by CCDS ID:8823.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8823.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293670.3 ENSP00000293670.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293670.3Link to Ensembl Protein Viewer:ENSP00000293670.3Re-query CCDS DB by Nucleotide ID:ENST00000293670Re-query CCDS DB by Protein ID:ENSP00000293670
Original member Current member NCBI NM_002282.3 NP_002273.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002282.3Link to Protein Sequence:NP_002273.3Re-query CCDS DB by Nucleotide ID:NM_002282Re-query CCDS DB by Protein ID:NP_002273Link to BLAST:NP_002273.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002273.3 493 P78385 493 100% 0 0

Chromosomal Locations for CCDS 8823.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52314631 52314818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52315312 52315343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52315893 52316113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52316468 52316593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52316859 52317023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52317681 52317776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52317910 52317970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52319156 52319364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52320952 52321335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGACCTGTGGCTTCAACTCCATAGGCTGTGGGTTCCGCCCTGGAAACTTCAGCTGTGTCTCTGCCTGCG
GGCCCCGGCCAAGCCGCTGCTGCATCACCGCCGCCCCCTACCGCGGCATCTCCTGCTACCGCGGCCTCAC
CGGGGGCTTTGGCAGCCACAGCGTGTGCGGGGGCTTCCGCGCCGGCTCCTGCGGACGCAGCTTCGGCTAC
CGCTCCGGGGGCGTGTGCGGACCCAGCCCCCCATGCATCACCACCGTGTCGGTCAACGAGAGCCTCCTCA
CGCCCCTCAACCTGGAGATAGACCCCAACGCGCAGTGCGTGAAGCAGGAGGAGAAGGAGCAGATCAAGTC
CCTCAACAGCAGATTCGCGGCCTTCATCGACAAGGTGCGCTTCCTGGAGCAGCAGAACAAGCTGCTGGAG
ACAAAGCTGCAGTTCTACCAAAACCGCGAGTGCTGCCAGAGTAACCTGGAGCCCCTGTTTGCTGGCTACA
TCGAGACTCTGCGGCGGGAGGCCGAGTGCGTGGAGGCTGACAGTGGGAGGCTGGCCTCAGAGCTCAACCA
CGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTATGAAGAAGAAGTAGCACTTCGAGCCACAGCAGAG
AACGAGTTTGTGGCTCTAAAGAAGGATGTGGACTGCGCCTACCTCCGCAAGTCAGACCTGGAGGCCAACG
TGGAGGCCCTGATCCAGGAGATTGACTTCCTGAGGCGGCTGTACGAGGAGGAGATCCGCATTCTCCAATC
CCACATCTCAGACACCTCCGTGGTTGTCAAGCTGGACAACAGCCGGGACCTGAACATGGACTGCATCGTT
GCCGAGATCAAGGCACAGTATGATGACATTGCCACCCGTAGCCGGGCTGAGGCCGAGTCCTGGTATCGCA
GCAAGTGTGAGGAGATGAAGGCCACAGTGATCAGGCACGGGGAGACCCTGCGCCGCACCAAGGAGGAGAT
CAACGAGCTGAACCGCATGATCCAGAGGCTGACAGCCGAGGTGGAGAATGCCAAGTGCCAGAACTCCAAG
CTGGAAGCTGCGGTGGCCCAGTCTGAGCAGCAGGGTGAGGCGGCCCTCAGTGATGCCCGCTGCAAGCTGG
CCGAGCTGGAGGGCGCCCTGCAGAAGGCCAAGCAAGACATGGCCTGCCTGATCAGGGAGTACCAGGAGGT
GATGAACTCCAAGCTAGGCCTGGATATCGAGATCGCCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAG
AGGCTGTGTGAAGGTGTTGAAGCTGTGAATGTCTGTGTCAGCAGCTCCCGGGGTGGGGTTGTGTGCGGGG
ATCTCTGCGTGTCGGGCTCCCGGCCGGTGACGGGCAGCGTCTGCAGTGCCCCCTGCAACGGGAACCTGGT
GGTGAGCACTGGTTTGTGCAAGCCCTGTGGCCAGCTGAACACCACCTGTGGAGGGGGCTCCTGCGGCCAG
GGGAGGCATTAA

Translation (493 aa):
MTCGFNSIGCGFRPGNFSCVSACGPRPSRCCITAAPYRGISCYRGLTGGFGSHSVCGGFRAGSCGRSFGY
RSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKVRFLEQQNKLLE
TKLQFYQNRECCQSNLEPLFAGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAE
NEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRILQSHISDTSVVVKLDNSRDLNMDCIV
AEIKAQYDDIATRSRAEAESWYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSK
LEAAVAQSEQQGEAALSDARCKLAELEGALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRRLLEGEEQ
RLCEGVEAVNVCVSSSRGGVVCGDLCVSGSRPVTGSVCSAPCNGNLVVSTGLCKPCGQLNTTCGGGSCGQ
GRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH