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Report for CCDS35657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35657.1 Public Mus musculus 1 Ugt1a10 23 108 98 CCDS HistoryNCBI Gene:394430Re-query CCDS DB by CCDS ID:35657.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35657.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113142.9 ENSMUSP00000108767.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113142.9Link to Ensembl Protein Viewer:ENSMUSP00000108767.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000113142Re-query CCDS DB by Protein ID:ENSMUSP00000108767
Original member Current member NCBI NM_201641.2 NP_964003.2 Accepted alive Link to Nucleotide Sequence:NM_201641.2Link to Protein Sequence:NP_964003.2Re-query CCDS DB by Nucleotide ID:NM_201641Re-query CCDS DB by Protein ID:NP_964003Link to BLAST:NP_964003.2

Chromosomal Locations for CCDS 35657.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 88055482 88056336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215044 88215175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215795 88215882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88216138 88216357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88218127 88218424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGGTTCCTGCAGCCTTTCCCACCTCTCTTCCTCTGTGTGTGTGTCTGCTCCTGGCCTCTGGCTTGGTCC
AGGCAGGCAGGCTGCTGGTGGTGCCCATGGATGGGAGCCACTGGTTCGACATGCAGATGGTTGTGGAGAA
ACTCATTCAGAGAGGGCATGAGGTTGTGGTAGTCATCCCAGAGGTGAGTTGGCGGCTGGGGAAATCCCTG
AATTGTACAGTGAAGACTTACTCGGTTTCTCACACTCTGGAGGACCTGGACAGAGAGTTCAAGTATTTTA
CTTACACTCAATGGAAAACTCCAGAACAAAGTATACGTTCTTTCATGACAGGCTCAGCTAGAGGTTTCTT
TGAACTAATGTTTTCACACTCTAGGGGTTTGTTTAATGACAAGAAGTTAGTGGAGTACTTGAAGCAGAGA
TCTTTTGATGCAGTGTTTCTGGATCCTTTCGATGTATGTGGATTAATTGTTGCCAAGTATCTGTCACTCC
CATCAGTGATCTTTGCAAGACTTTCATTTTGCTACTATCTTGAAGAGGGTGCCCAGTGCCCGAGTCTTCT
TTCTTATGTTCCTAGACTTTTCTCAAAATACACAGACACCATGACTTTCAAGGAGAGAGTGTGGAACCAT
TATATGTACATTGAAGACTATGTATTTTGCCCCTATTTTTTCAAAACTGCTGTTGAAATTGCCTCTGAAG
TTCTGCAGACCCCAGTGACTATGACAGACCTCTTTAGCCCAGTGTCTATTTGGTTGTTACGCACTGACTT
TGTGTTGGAGTTCCCCAGACCTGTGATGCCCAACATGGTCTTTGTTGGTGGGATGAACTGTCTCCAGGGG
AAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT
TGGGATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGCAGAATTCC
TCAGACGGTCCTGTGGCGCTACACCGGAACTAGACCATCGAATCTTGCAAAGAACACAATTCTTGTCAAA
TGGCTACCCCAAAATGATCTGCTTGGTCATCCAAAGACTCGGGCATTCATCACACACTCTGGCTCCCATG
GTATTTATGAAGGAATATGCAATGGAGTTCCGATGGTGATGATGCCCCTATTTGGCGATCAGATGGACAA
TGCCAAGCGCATGGAAACTCGGGGAGCTGGGGTGACCCTGAATGTCCTTGAAATGACTGCTGATGATTTG
GAAAATGCCCTTAAAACTGTCATCAACAACAAGAGCTACAAGGAGAACATCATGCGCCTCTCCAGCCTTC
ACAAGGACCGTCCTATAGAGCCTCTGGACCTGGCTGTGTTCTGGGTGGAATACGTGATGAGGCACAAGGG
GGCACCACACCTGCGCCCGGCCGCCCATGACCTCACCTGGTATCAGTACCACTCCTTGGATGTGATTGGC
TTCCTCCTGGCCATTGTGTTGACAGTGGTCTTCATTGTCTTTAAATGTTGTGCCTATGGCTGCCGGAAAT
GCTTTGGGGGAAAGGGGCGAGTGAAGAAATCACACAAATCCAAGACCCATTGA

Translation (530 aa):
MVPAAFPTSLPLCVCLLLASGLVQAGRLLVVPMDGSHWFDMQMVVEKLIQRGHEVVVVIPEVSWRLGKSL
NCTVKTYSVSHTLEDLDREFKYFTYTQWKTPEQSIRSFMTGSARGFFELMFSHSRGLFNDKKLVEYLKQR
SFDAVFLDPFDVCGLIVAKYLSLPSVIFARLSFCYYLEEGAQCPSLLSYVPRLFSKYTDTMTFKERVWNH
YMYIEDYVFCPYFFKTAVEIASEVLQTPVTMTDLFSPVSIWLLRTDFVLEFPRPVMPNMVFVGGMNCLQG
KPLSKEFEAYVNASGEHGIVVFSLGSMVSEIPEKKAMEIAEALGRIPQTVLWRYTGTRPSNLAKNTILVK
WLPQNDLLGHPKTRAFITHSGSHGIYEGICNGVPMVMMPLFGDQMDNAKRMETRGAGVTLNVLEMTADDL
ENALKTVINNKSYKENIMRLSSLHKDRPIEPLDLAVFWVEYVMRHKGAPHLRPAAHDLTWYQYHSLDVIG
FLLAIVLTVVFIVFKCCAYGCRKCFGGKGRVKKSHKSKTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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