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Report for CCDS15589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15589.1 Public Mus musculus 1 Ccdc185 23 108 98 CCDS HistoryNCBI Gene:433386Re-query CCDS DB by CCDS ID:15589.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15589.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060041.6 ENSMUSP00000095053.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060041.6Link to Ensembl Protein Viewer:ENSMUSP00000095053.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000060041Re-query CCDS DB by Protein ID:ENSMUSP00000095053
Original member Current member NCBI NM_001033547.2 NP_001028719.1 Accepted alive Link to Nucleotide Sequence:NM_001033547.2Link to Protein Sequence:NP_001028719.1Re-query CCDS DB by Nucleotide ID:NM_001033547Re-query CCDS DB by Protein ID:NP_001028719Link to BLAST:NP_001028719.1

Chromosomal Locations for CCDS 15589.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 182747257 182749122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGCCGGTTTCCATCTCTTCTCCCCACGGTCCTATGGGGAGCTCGGGGAACCCTTGCTAGCTGGAGAGC
AG
GAGTTCGCAGCCCAGCTGGGCTGGTCTGAGTTGTCTCTGAGTCCCTGGGCCCAGACTCCTGGCGCCGA
G
ATCGAGACCGAGGTGCCCTGGGTGCACCCAAAGTGTTCGCCCACTGGGCGGTCCCGCCGGCGTGGGTAT
ATG
ACCTTGCCACGAGAAAGCCACAGCCTGACATACGTGGCCCGAAGACCCTCGGACCGAGCCAGGAAGC
AC
AGGTCCGGCAGCCTCTGCCTGGAAGGAGCCTGCGGGGAGGCACCAACCAAGTCCAGCAGAACCTGGCA
G
CAGCAGCAGCCGCCACGGGATCAACCCAGCCCGCGCTACCCTGCAGCCCGGGGAGATTCATCCCTGCAG
TAC
ATCCGGGAAGCTTTCAGTCCCCCGAATGCTGGAACGTTGCTTGTAGAAAACACACACCCTGGAGACC
GG
TGGGCAGTGCCGGTGGGCAGACGTGTAGGTCTCTGGTCTCCTTCCTCGGTTCTCACCGACAAGTCCTC
T
GTTCACTCCCTAGAGTTATGTAAGCAATCCACCCAGAATAGGAGTAACCGCGACCTGACTGAGTCCTTA
AAC
AAGTATGACTGTCCCTCTGCCTCCTGCAAAGAGAAGAGTAGCCAGCACGCTCAGGTCCTCAAGAGCA
AG
CTGGACGAGACGGTTATATCTTTGAGGGACCAGAAGATCTTGGCCCTGGTGCTGAGCAGGCTCAAGAA
G
GCCCAGAGGATGCGAGAGCTGCAGCAACAGGCTGCAGTCGCCTGGGAAGAGCTGAAGCGCTCAGACCAG
AAA
GTTCACTTGACCCTCGAGAGAGAGCGCAAGCTGCTGCTGCTGCAGAGCCAGGAGCAATGGCAAGGAC
AG
AGGGAACAGCACAAGCCTCAGAGGGGCCATGGCCATGAGCAGCCTCACCAGGGTTACAAGCAGCAGGG
A
CCGCGGCGCGACCGCCAGGCAAGGAGCGCTGTTCGGTCAGAGAACGAGAGTGAGTGGATGGTTCAAGCT
GAC
AACCCGGAGATCCGAGGCCTGGCCAAGATGGACAAGGTGCAAGCGCAGGCCGAGCATCTCAAACAGT
GC
CAAGTGCAGAGTCTGCGGGAGCAGGAGAGGGTGCTGCAGAGTGTTCGGGACCTGAACAGGCTGCAGCT
G
CAGAAGAGGCTGGAGATAGCGGGTCACAAGAGGGAGCATGTGATGATGGAGAGCCCGAAGAAGCTCCAG
GAG
AGCAACCTGAGCACGGTTGTCAACTTCCAGGCCCGCAAGGTTCTCATGGACTGCCAGGCCAAGGCGG
AG
GAACTCCTCAGGAAGCTGTCGCTGGAGCAGAGTTCCCAGAGCTCCCAGAGCTACCAGGACATCCAAAA
G
GGTCTGGTGAAGGAGCAGAGGCACAGAGAGCAGCAGGCAAAGGCCCAGACTGAGGCAGAGCAGTTCCAG
AGA
AGGAGATGGCATGCCGAGGAGGCAGAGGAGCTGCTCCAAGTGAGCAAGCGGGTGCTGGCAGAGCTGG
CT
GAACAGAAGAGCAGGCAGGCCAGGAGTCATGCGCACAAGACCACCAGGGACAGGGCGCAGCACCTGCA
G
GAGCTGAACATCCTGCGCGAGAGGAACCATCATATCTTGAAGCTGACAGCGGAGAAGGAGGAGAAGTGT
CAC
ATCAAGGGCATCAAGGAAGCCATCAAGAAGAAGGAACAAAGGTTAGCGCAGATGACCTCAGGGAAAG
AT
CCCATCTTCCAGGAGTATCAGAAGGGTCCCGCGTCCTCCAAGATAAACCGCTGCTTTGACCAGGTGGC
A
GCAGAGCCCCAGCTGTCCGTGCACCTGCAGAGTGGAGTCTACTGA


Translation (621 aa):
MAGFHLFSPRSYGELGEPLLAGEQEFAAQLGWSELSLSPWAQTPGAEIETEVPWVHPKCSPTGRSRRRGY
M
TLPRESHSLTYVARRPSDRARKHRSGSLCLEGACGEAPTKSSRTWQQQQPPRDQPSPRYPAARGDSSLQ
Y
IREAFSPPNAGTLLVENTHPGDRWAVPVGRRVGLWSPSSVLTDKSSVHSLELCKQSTQNRSNRDLTESL
N
KYDCPSASCKEKSSQHAQVLKSKLDETVISLRDQKILALVLSRLKKAQRMRELQQQAAVAWEELKRSDQ
K
VHLTLERERKLLLLQSQEQWQGQREQHKPQRGHGHEQPHQGYKQQGPRRDRQARSAVRSENESEWMVQA
D
NPEIRGLAKMDKVQAQAEHLKQCQVQSLREQERVLQSVRDLNRLQLQKRLEIAGHKREHVMMESPKKLQ
E
SNLSTVVNFQARKVLMDCQAKAEELLRKLSLEQSSQSSQSYQDIQKGLVKEQRHREQQAKAQTEAEQFQ
R
RRWHAEEAEELLQVSKRVLAELAEQKSRQARSHAHKTTRDRAQHLQELNILRERNHHILKLTAEKEEKC
H
IKGIKEAIKKKEQRLAQMTSGKDPIFQEYQKGPASSKINRCFDQVAAEPQLSVHLQSGVY




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser