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Report for CCDS19391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19391.1 Public Mus musculus 5 Sult1b1 23 108 98 CCDS HistoryNCBI Gene:56362Re-query CCDS DB by CCDS ID:19391.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19391.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031199.10 ENSMUSP00000031199.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031199.10Link to Ensembl Protein Viewer:ENSMUSP00000031199.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000031199Re-query CCDS DB by Protein ID:ENSMUSP00000031199
Original member Current member EBI ENSMUST00000117455.7 ENSMUSP00000112679.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117455.7Link to Ensembl Protein Viewer:ENSMUSP00000112679.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117455Re-query CCDS DB by Protein ID:ENSMUSP00000112679
Original member Current member EBI ENSMUST00000120150.1 ENSMUSP00000112844.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120150.1Link to Ensembl Protein Viewer:ENSMUSP00000112844.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120150Re-query CCDS DB by Protein ID:ENSMUSP00000112844
Original member Current member NCBI NM_001356943.1 NP_001343872.1 Accepted alive Link to Nucleotide Sequence:NM_001356943.1Link to Protein Sequence:NP_001343872.1Re-query CCDS DB by Nucleotide ID:NM_001356943Re-query CCDS DB by Protein ID:NP_001343872Link to BLAST:NP_001343872.1
Original member Current member NCBI NM_019878.4 NP_063931.1 Accepted alive Link to Nucleotide Sequence:NM_019878.4Link to Protein Sequence:NP_063931.1Re-query CCDS DB by Nucleotide ID:NM_019878Re-query CCDS DB by Protein ID:NP_063931Link to BLAST:NP_063931.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343872.1 299 Q9QWG7-1 299 100% 0 0
NP_063931.1 299 Q9QWG7-1 299 100% 0 0

Chromosomal Locations for CCDS 19391.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 87514940 87515061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87517296 87517476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87520785 87520879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87521486 87521612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87530589 87530686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87533901 87534029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87534937 87535084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGAGTGCCTCAGAAGACGTTTGGAGAAAAGATCTGAAGATGATCCATGGCTACCCCATGATCTATGCTT
TTGCACTCAATTGGGAAAGGATTGAAGAGTTCCAGAGCACACCAGGTGACATTGTAATAACCACTTACCC
TAAATCAGGTACTACTTGGCTTAGTGAGATTGTAGACATGGTTCTAAATGATGGAAATGTTGAAAAATGT
AAGAGAGATGTTATCACCTCCAAAGTTCCAATGTTGGAACTGAGTGTTCCTGGAATAAGAATATCAGGTG
TTGAACTCTTGAAGAAAACTCCATCACCTCGGATAATAAAGACACATCTTCCAATCGATCTACTCCCAAA
ATCCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTGCTCGAAATGGCAAGGATGTTGCTGTCTCCTAT
TATCATTTTGATCTGATGAATAGTATTAATCCTCTTCCTGGCACCTGGGAAGAATATCTGGAGAAATTCC
TAGCTGGAAATGTGGCCTATGGTTCATGGTTTGATCATGTTAAGAGTTGGTGGGAAAAGAGGGAAGAGCA
TCCTTTACTTTACTTATACTATGAAGAATTGAAACAGAACCCAAAGAAAGAAATCAAGAAGATAGCCAGC
TTTCTAGACAAGACCTTGGATGAAGAGGCCTTGGACAGGATCGTCCATCACACCTCCTTTGAAATGATGA
AGGAAAACCCCCTGGTCAATTACACCCATCTGCCCACAGCAATGATGGACCACAGCAAGTCCCCTTTCAT
GAGAAAAGGTATTGTTGGGGACTGGAAAAATTACTTCACAATGACCCAAACTGAGCAATTTGATGCTGTC
TATAAGAAGAAGATGTCTGGAACAACACTTGAGTTCTGCACAGACATTCAGAGTGCCTAA

Translation (299 aa):
MSASEDVWRKDLKMIHGYPMIYAFALNWERIEEFQSTPGDIVITTYPKSGTTWLSEIVDMVLNDGNVEKC
KRDVITSKVPMLELSVPGIRISGVELLKKTPSPRIIKTHLPIDLLPKSFWENKCKMIYLARNGKDVAVSY
YHFDLMNSINPLPGTWEEYLEKFLAGNVAYGSWFDHVKSWWEKREEHPLLYLYYEELKQNPKKEIKKIAS
FLDKTLDEEALDRIVHHTSFEMMKENPLVNYTHLPTAMMDHSKSPFMRKGIVGDWKNYFTMTQTEQFDAV
YKKKMSGTTLEFCTDIQSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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