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Report for CCDS43135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43135.1 Public Homo sapiens 3 ARHGAP31 24 110 108 CCDS HistoryNCBI Gene:57514Re-query CCDS DB by CCDS ID:43135.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43135.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264245.9 ENSP00000264245.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264245.9Link to Ensembl Protein Viewer:ENSP00000264245.4Re-query CCDS DB by Nucleotide ID:ENST00000264245Re-query CCDS DB by Protein ID:ENSP00000264245
Original member Current member NCBI NM_020754.4 NP_065805.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020754.4Link to Protein Sequence:NP_065805.2Re-query CCDS DB by Nucleotide ID:NM_020754Re-query CCDS DB by Protein ID:NP_065805Link to BLAST:NP_065805.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065805.2 1444 Q2M1Z3 1444 100% 0 0

Chromosomal Locations for CCDS 43135.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 119294905 119295004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119365316 119365418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119368372 119368516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119380904 119380986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119382292 119382399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119383084 119383226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119390785 119390983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119393467 119393591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119399199 119399261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119401822 119402397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119409496 119409776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119413856 119416264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4335 nt):
ATGAAGAACAAGGGTGCTAAGCAGAAGCTGAAACGAAAGGGAGCCGCCAGCGCGTTTGGCTGTGACCTGA
CGGAGTATCTGGAAAGCTCGGGACAGGATGTTCCATACGTTTTGAAGAGCTGTGCAGAATTTATAGAGAC
TCACGGCATCGTGGATGGAATCTATCGGCTTTCAGGAGTCACCTCAAACATACAACGGCTAAGGCAAGAG
TTTGGCTCAGATCAATGTCCAGATCTGACAAGGGAAGTGTACCTCCAGGACATCCACTGTGTGGGCTCGC
TTTGCAAGCTCTACTTTAGGGAGCTGCCCAACCCCCTCCTGACTTATGAGCTCTATGAGAAATTCACGGA
GGCAGTGTCGCATTGCCCTGAAGAAGGCCAACTGGCCCGAATCCAAAATGTTATCCAGGAGCTTCCTCCA
TCCCACTATAGGACCTTGGAATACCTGATTCGACACCTGGCCCATATCGCCTCCTTCAGCAGCAAGACCA
ACATGCACGCCCGGAACCTGGCCCTGGTGTGGGCGCCAAACCTCCTCAGGTCTAAAGAAATTGAAGCCAC
TGGTTGCAATGGAGATGCAGCCTTCCTTGCAGTCCGGGTCCAGCAGGTGGTGATTGAGTTCATATTGAAT
CATGTAGATCAAATCTTTAACAACGGTGCACCTGGGTCTCTGGAGAATGATGAAAACCGGCCCATCATGA
AGAGCCTGACCTTGCCAGCCCTCTCCCTGCCCATGAAGCTGGTGAGCCTTGAGGAAGCTCAAGCCCGCAG
CCTGGCCACTAACCATCCTGCTCGCAAGGAAAGGAGGGAGAACAGCCTGCCTGAGATTGTCCCTCCCATG
GGCACCCTCTTCCACACTGTCCTTGAGTTACCAGACAACAAGCGAAAGCTCTCCAGTAAATCAAAGAAGT
GGAAATCAATATTTAACCTGGGACGTTCTGGATCAGACTCCAAATCAAAACTGAGTAGAAATGGGAGTGT
ATTTGTGAGAGGACAGAGGCTCTCGGTGGAAAAGGCTACTATCCGACCAGCTAAAAGCATGGACTCACTA
TGTTCAGTGCCTGTGGAAGGAAAAGAAACCAAGGGAAATTTCAATCGAACAGTTACCACCGGTGGATTTT
TCATTCCAGCAACAAAGATGCACTCCACCGGCACCGGCAGCTCATGTGACCTCACCAAGCAGGAGGGCGA
ATGGGGCCAGGAGGGGATGCCTCCCGGGGCTGAGGGTGGCTTTGATGTGAGCAGTGATCGCAGCCATCTC
CAGGGCGCTCAGGCCCGGCCCCCACCGGAACAGCTGAAGGTTTTCCGGCCTGTTGAGGATCCGGAGAGCG
AGCAAACAGCCCCAAAGATGTTGGGTATGTTCTACACTTCGAACGACAGCCCTAGCAAATCCGTCTTCAC
CAGCAGCCTCTTCCAGATGGAGCCCTCGCCGCGTAACCAGCGCAAGGCGCTGAACATCTCCGAGCCCTTT
GCGGTATCTGTGCCGCTCCGCGTGTCCGCAGTCATCAGCACCAACAGCACGCCGTGCAGAACACCCCCGA
AGGAGCTGCAGTCTCTTTCCAGCCTGGAAGAGTTTTCTTTTCATGGATCAGAGAGCGGAGGCTGGCCAGA
AGAAGAGAAACCGCTGGGAGCTGAGACTTCTGCAGCTTCTGTACCTAAGAAGGCAGGTCTTGAGGATGCC
AAGGCAGTACCTGAAGCACCGGGGACAGTGGAATGCAGCAAAGGCCTGTCCCAGGAGCCAGGCGCCCACC
TGGAGGAGAAGAAAACCCCAGAAAGCTCCTTGAGCTCTCAACATTTAAATGAATTAGAGAAGAGGCCAAA
TCCGGAGAAGGTGGTGGAGGAGGGACGAGAGGCTGGTGAGATGGAGTCCAGCACCCTGCAGGAGAGCCCC
AGGGCCAGAGCCGAAGCTGTGCTTCTCCATGAGATGGATGAAGATGATCTGGCCAATGCCCTGATCTGGC
CTGAGATTCAACAGGAGCTGAAAATCATTGAATCTGAGGAGGAGCTCTCATCGTTGCCACCTCCTGCTCT
GAAGACCAGCCCAATTCAGCCTATTCTCGAGTCGAGTCTGGGGCCCTTTATTCCCTCAGAGCCTCCTGGG
AGCTTGCCTTGTGGCTCCTTCCCTGCTCCAGTCTCCACCCCTCTGGAGGTGTGGACTAGGGATCCAGCCA
ATCAGAGCACACAGGGGGCTTCCACAGCAGCCAGCAGAGAGAAGCCGGAACCTGAGCAGGGCCTGCACCC
AGACCTCGCCAGCCTGGCTCCTCTGGAAATAGTTCCTTTTGAGAAGGCATCTCCACAAGCAACAGTGGAA
GTAGGAGGCCCAGGCAATCTGTCTCCTCCACTCCCACCTGCTCCTCCCCCTCCAACTCCTCTGGAGGAGT
CAACTCCAGTCCTGCTTTCAAAGGGCGGCCCGGAAAGAGAAGACTCATCCAGGAAATTGAGGACAGATCT
CTACATAGACCAGCTGAAGTCCCAAGACAGCCCTGAGATCTCTAGCCTCTGTCAGGGAGAGGAGGCAACC
CCAAGACACAGTGACAAGCAAAATTCAAAGAATGCTGCTTCTGAGGGGAAAGGCTGTGGTTTTCCAAGCC
CAACCAGGGAGGTTGAGATCGTCTCACAAGAAGAGGAGGATGTAACCCATTCAGTACAGGAGCCTTCAGA
CTGTGACGAAGATGACACTGTGACAGACATTGCCCAGCATGGCCTGGAGATGGTGGAGCCCTGGGAGGAA
CCCCAGTGGGTGACGAGTCCCCTTCACTCTCCCACCCTGAAAGACGCGCACAAGGCCCAGGTACAGGGCC
TTCAGGGTCACCAGTTGGAGAAGAGGCTTTCCCACAGGCCCAGCCTTCGCCAGAGCCATTCTCTAGATAG
CAAACCCACGGTTAAAAGCCAGTGGACTCTCGAGGTTCCCTCCTCCAGCAGCTGTGCTAATCTTGAAACA
GAGAGGAATTCTGACCCTCTTCAGCCCCAGGCACCCAGGAGAGAGATTACTGGATGGGATGAGAAAGCCC
TGAGGTCCTTCAGAGAGTTCTCTGGCCTGAAAGGGGCAGAGGCTCCTCCCAACCAGAAGGGACCAAGTGG
TGTGCAACCCAACCCAGCAGAAACCAGCCCCATCAGCCTAGCAGAGGGAAAGGAGCTAGGGACACACCTG
GGGCACAGCAGTCCACAGATTAGGCAAGGTGGTGTTCCTGGGCCAGAGAGCAGCAAGGAGAGTTCACCCA
GCGTGCAGGACAGCACTTCGCCTGGAGAGCACCCCGCAAAGTTACAGCTAAAGAGCACAGAGTGTGGGCC
CCCAAAAGGGAAAAACAGGCCTTCTTCCCTCAACTTGGACCCTGCCATTCCCATTGCTGACCTCTTCTGG
TTTGAGAATGTGGCCTCATTTAGTTCACCTGGAATGCAGGTCTCTGAGCCAGGAGACCCAAAGGTCACAT
GGATGACCTCATCTTACTGTAAAGCAGACCCCTGGAGGGTTTACTCCCAGGACCCCCAGGACCTGGACAT
TGTTGCTCATGCACTGACAGGCCGCCGTAACTCAGCTCCTGTGAGTGTGTCAGCTGTGAGAACCTCCTTC
ATGGTCAAAATGTGCCAGGCCAGGGCGGTCCCAGTCATCCCTCCCAAGATTCAGTACACCCAGATCCCAC
AGCCCCTGCCCTCTCAGAGCTCAGGGGAGAATGGGGTTCAGCCTCTGGAGAGGAGCCAGGAGGGACCCAG
CTCAACCAGTGGGACCACTCAGAAACCTGCCAAAGATGATTCTCCCTCCTCCCTGGAAAGCTCAAAGGAA
GAAAAACCAAAGCAAGATCCCGGAGCCATTAAGTCCTCACCAGTGGATGCCACTGCACCCTGCATGTGCG
AGGGACCTACCCTTTCTCCAGAACCAGGCTCGTCTAACCTGCTCTCCACCCAGGATGCAGTAGTGCAATG
CAGAAAGCGCATGTCAGAGACAGAGCCATCTGGGGACAACCTTCTTTCTTCAAAACTAGAGCGACCATCT
GGGGGTTCTAAGCCTTTCCACAGGTCAAGGCCAGGAAGACCTCAGAGCCTAATCTTATTCAGTCCTCCTT
TCCCCATTATGGACCACCTGCCCCCTTCATCCACAGTGACAGATTCCAAGGTCCTGCTGTCCCCTATCAG
AAGTCCCACCCAGACAGTTTCCCCTGGCCTTCTTTGTGGAGAGTTGGCAGAAAACACATGGGTCACACCA
GAAGGGGTTACACTTAGGAATAAAATGACCATCCCTAAGAATGGCCAGAGACTAGAGACCTCAACCAGCT
GTTTTTACCAGCCTCAGCGGAGATCAGTAATTCTGGATGGAAGAAGTGGGAGGCAAATAGAATGA

Translation (1444 aa):
MKNKGAKQKLKRKGAASAFGCDLTEYLESSGQDVPYVLKSCAEFIETHGIVDGIYRLSGVTSNIQRLRQE
FGSDQCPDLTREVYLQDIHCVGSLCKLYFRELPNPLLTYELYEKFTEAVSHCPEEGQLARIQNVIQELPP
SHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLRSKEIEATGCNGDAAFLAVRVQQVVIEFILN
HVDQIFNNGAPGSLENDENRPIMKSLTLPALSLPMKLVSLEEAQARSLATNHPARKERRENSLPEIVPPM
GTLFHTVLELPDNKRKLSSKSKKWKSIFNLGRSGSDSKSKLSRNGSVFVRGQRLSVEKATIRPAKSMDSL
CSVPVEGKETKGNFNRTVTTGGFFIPATKMHSTGTGSSCDLTKQEGEWGQEGMPPGAEGGFDVSSDRSHL
QGAQARPPPEQLKVFRPVEDPESEQTAPKMLGMFYTSNDSPSKSVFTSSLFQMEPSPRNQRKALNISEPF
AVSVPLRVSAVISTNSTPCRTPPKELQSLSSLEEFSFHGSESGGWPEEEKPLGAETSAASVPKKAGLEDA
KAVPEAPGTVECSKGLSQEPGAHLEEKKTPESSLSSQHLNELEKRPNPEKVVEEGREAGEMESSTLQESP
RARAEAVLLHEMDEDDLANALIWPEIQQELKIIESEEELSSLPPPALKTSPIQPILESSLGPFIPSEPPG
SLPCGSFPAPVSTPLEVWTRDPANQSTQGASTAASREKPEPEQGLHPDLASLAPLEIVPFEKASPQATVE
VGGPGNLSPPLPPAPPPPTPLEESTPVLLSKGGPEREDSSRKLRTDLYIDQLKSQDSPEISSLCQGEEAT
PRHSDKQNSKNAASEGKGCGFPSPTREVEIVSQEEEDVTHSVQEPSDCDEDDTVTDIAQHGLEMVEPWEE
PQWVTSPLHSPTLKDAHKAQVQGLQGHQLEKRLSHRPSLRQSHSLDSKPTVKSQWTLEVPSSSSCANLET
ERNSDPLQPQAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGPSGVQPNPAETSPISLAEGKELGTHL
GHSSPQIRQGGVPGPESSKESSPSVQDSTSPGEHPAKLQLKSTECGPPKGKNRPSSLNLDPAIPIADLFW
FENVASFSSPGMQVSEPGDPKVTWMTSSYCKADPWRVYSQDPQDLDIVAHALTGRRNSAPVSVSAVRTSF
MVKMCQARAVPVIPPKIQYTQIPQPLPSQSSGENGVQPLERSQEGPSSTSGTTQKPAKDDSPSSLESSKE
EKPKQDPGAIKSSPVDATAPCMCEGPTLSPEPGSSNLLSTQDAVVQCRKRMSETEPSGDNLLSSKLERPS
GGSKPFHRSRPGRPQSLILFSPPFPIMDHLPPSSTVTDSKVLLSPIRSPTQTVSPGLLCGELAENTWVTP
EGVTLRNKMTIPKNGQRLETSTSCFYQPQRRSVILDGRSGRQIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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