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Report for CCDS33124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33124.1 Public Homo sapiens 19 USP29 24 110 108 CCDS HistoryNCBI Gene:57663Re-query CCDS DB by CCDS ID:33124.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254181.9 ENSP00000254181.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254181.9Link to Ensembl Protein Viewer:ENSP00000254181.3Re-query CCDS DB by Nucleotide ID:ENST00000254181Re-query CCDS DB by Protein ID:ENSP00000254181
Original member Current member EBI ENST00000598197.1 ENSP00000470747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598197.1Link to Ensembl Protein Viewer:ENSP00000470747.1Re-query CCDS DB by Nucleotide ID:ENST00000598197Re-query CCDS DB by Protein ID:ENSP00000470747
Original member Current member NCBI NM_001389643.1 NP_001376572.1 Accepted alive Link to Nucleotide Sequence:NM_001389643.1Link to Protein Sequence:NP_001376572.1Re-query CCDS DB by Nucleotide ID:NM_001389643Re-query CCDS DB by Protein ID:NP_001376572Link to BLAST:NP_001376572.1
Original member Current member NCBI NM_020903.3 NP_065954.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020903.3Link to Protein Sequence:NP_065954.1Re-query CCDS DB by Nucleotide ID:NM_020903Re-query CCDS DB by Protein ID:NP_065954Link to BLAST:NP_065954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001376572.1 922 Q9HBJ7 922 100% 0 0
NP_065954.1 922 Q9HBJ7 922 100% 0 0

Chromosomal Locations for CCDS 33124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57128676 57131444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2769 nt):
ATGATATCTCTAAAGGTATGTGGATTCATCCAAATTTGGAGCCAGAAGACTGGGATGACTAAGCTGAAAG
AAGCTCTCATTGAAACAGTGCAAAGACAAAAGGAAATTAAACTGGTGGTCACTTTCAAATCTGGAAAATT
TATAAGAATTTTTCAGCTGAGCAACAACATTAGAAGTGTGGTCCTTAGACATTGTAAAAAAAGACAAAGT
CACCTGCGTTTAACTTTGAAAAACAACGTGTTCTTGTTTATTGACAAATTATCCTACAGAGATGCTAAAC
AGTTGAATATGTTCCTGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTG
GAGTGTGTTTGAAAGCAGGAATATGCTGAAGGAAATTGACAAAACTTCATTTTACAGCATTTGTAACAAG
CCAAGTTATCAGAAGATGCCTTTGTTTATGTCAAAATCACCAACACATGTGAAAAAGGGGATATTAGAAA
ATCAAGGTGGGAAGGGGCAAAACACACTATCATCTGATGTACAGACAAATGAGGACATTCTGAAGGAAGA
TAACCCTGTACCAAACAAGAAATATAAGACAGATTCCTTGAAATATATACAAAGCAATAGGAAGAACCCA
TCAAGTTTAGAGGATTTAGAAAAAGATAGAGATTTGAAACTCGGGCCTTCATTCAATACCAACTGTAATG
GAAATCCTAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCC
ATTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCA
CAGCAACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCTGTTACATGAATGCAGTTTTACAATCGCTAT
TTGCAATTCCATCTTTTGCTGATGACTTACTCACTCAAGGTGTCCCATGGGAATATATTCCCTTTGAGGC
TCTTATTATGACCTTGACCCAGCTGCTTGCTTTGAAAGATTTCTGTAGTACAAAGATCAAGAGAGAATTA
CTTGGGAATGTTAAAAAAGTCATTTCAGCAGTTGCAGAAATATTTTCTGGCAACATGCAGAATGATGCTC
ATGAGTTTTTAGGTCAGTGTTTAGACCAGCTGAAAGAAGACATGGAAAAATTAAATGCCACTTTGAATAC
TGGGAAAGAATGTGGGGATGAAAATTCATCTCCACAAATGCATGTTGGTAGTGCTGCCACCAAAGTGTTT
GTTTGCCCTGTTGTTGCTAATTTTGAGTTTGAATTGCAGCTCTCCCTTATTTGTAAAGCTTGTGGTCATG
CTGTTCTCAAGGTAGAACCTAATAATTATCTCTCCATCAACCTGCACCAAGAAACAAAACCACTTCCTTT
GTCCATTCAGAATTCTTTAGATCTTTTCTTTAAAGAAGAAGAGCTTGAATATAACTGTCAGATGTGTAAG
CAGAAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCTCTCCAGGGTCCTTATCATTCATCTGAAACGCT
ATAGCTTCAACAATGCTTGGTTGCTGGTGAAGAATAACGAGCAAGTTTATATTCCCAAATCTTTAAGTTT
ATCTTCTTATTGCAATGAAAGCACCAAACCACCTCTTCCCTTGAGCAGTAGTGCACCTGTTGGGAAATGT
GAAGTCCTGGAAGTCTCTCAGGAGATGATTTCTGAGATCAACAGCCCATTGACACCATCAATGAAGCTGA
CCTCAGAATCCAGTGATTCCCTGGTTCTACCCGTTGAACCAGACAAGAATGCCGACCTACAAAGATTCCA
GAGAGACTGTGGAGATGCAAGCCAAGAGCAGCATCAGAGAGACCTGGAAAATGGCTCTGCACTAGAGTCA
GAATTGGTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAGCTTCCAGTGGCTGACTCACTGATGGACC
AGGGAGACATTTCTCTTCCTGTGATGTATGAAGATGGAGGGAAGCTGATCAGCAGCCCAGACACAAGGCT
TGTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAGAAAACCAATACATTC
GTAGAGTTCAATTTTGACAGTGTCACTGAGTCCACCAATGGCTTTTATGACTGTAAAGAAAACAGGATTC
CAGAAGGATCTCAAGGAATGGCTGAACAGCTCCAGCAGTGTATTGAGGAGAGCATCATAGATGAATTTCT
TCAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACATACAGAAGAGACCCTCAATCAG
TCTACAGAATTAAGACTTCAAAAGGCTGACCTGAATCACCTTGGGGCACTGGGTTCTGACAACCCAGGAA
ACAAAAACATTTTAGATGCAGAGAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAACGTGAAGATGGG
GGATCCTCTCCAGGCCTACAGACTCATCAGTGTTGTCAGCCATATCGGGAGCTCCCCAAATTCAGGCCAT
TACATCAGCGATGTGTATGACTTTCAGAAGCAGGCCTGGTTCACATACAACGATCTATGTGTATCAGAAA
TCTCAGAGACCAAAATGCAGGAGGCGAGGCTTCACTCTGGGTATATCTTCTTTTACATGCACAATGGGAT
TTTTGAGGAGCTGTTAAGAAAAGCAGAGAACTCTCGGCTACCTAGCACACAGGCAGGGGTGATCCCTCAG
GGGGAATACGAAGGTGACTCTTTGTACAGACCTGCTTGA

Translation (922 aa):
MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSVVLRHCKKRQS
HLRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVFESRNMLKEIDKTSFYSICNK
PSYQKMPLFMSKSPTHVKKGILENQGGKGQNTLSSDVQTNEDILKEDNPVPNKKYKTDSLKYIQSNRKNP
SSLEDLEKDRDLKLGPSFNTNCNGNPNLDETVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHS
QQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL
LGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVF
VCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCK
QKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPLPLSSSAPVGKC
EVLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKNADLQRFQRDCGDASQEQHQRDLENGSALES
ELVHFRDRAIGEKELPVADSLMDQGDISLPVMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTF
VEFNFDSVTESTNGFYDCKENRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTEETLNQ
STELRLQKADLNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGH
YISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRLPSTQAGVIPQ
GEYEGDSLYRPA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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