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Report for CCDS5026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5026.1 Public Homo sapiens 6 BACH2 24 110 108 CCDS HistoryNCBI Gene:60468Re-query CCDS DB by CCDS ID:5026.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5026.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257749.9 ENSP00000257749.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257749.9Link to Ensembl Protein Viewer:ENSP00000257749.4Re-query CCDS DB by Nucleotide ID:ENST00000257749Re-query CCDS DB by Protein ID:ENSP00000257749
Original member Current member EBI ENST00000343122.7 ENSP00000345642.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343122.7Link to Ensembl Protein Viewer:ENSP00000345642.3Re-query CCDS DB by Nucleotide ID:ENST00000343122Re-query CCDS DB by Protein ID:ENSP00000345642
Original member Current member EBI ENST00000406998.7 ENSP00000384145.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406998.7Link to Ensembl Protein Viewer:ENSP00000384145.3Re-query CCDS DB by Nucleotide ID:ENST00000406998Re-query CCDS DB by Protein ID:ENSP00000384145
Original member Current member EBI ENST00000453877.6 ENSP00000397668.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453877.6Link to Ensembl Protein Viewer:ENSP00000397668.2Re-query CCDS DB by Nucleotide ID:ENST00000453877Re-query CCDS DB by Protein ID:ENSP00000397668
Original member Current member EBI ENST00000695952.1 ENSP00000512284.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695952.1Link to Ensembl Protein Viewer:ENSP00000512284.1Re-query CCDS DB by Nucleotide ID:ENST00000695952Re-query CCDS DB by Protein ID:ENSP00000512284
Original member Current member NCBI NM_001170794.2 NP_001164265.1 Accepted alive Link to Nucleotide Sequence:NM_001170794.2Link to Protein Sequence:NP_001164265.1Re-query CCDS DB by Nucleotide ID:NM_001170794Re-query CCDS DB by Protein ID:NP_001164265Link to BLAST:NP_001164265.1
Original member Current member NCBI NM_021813.4 NP_068585.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021813.4Link to Protein Sequence:NP_068585.1Re-query CCDS DB by Nucleotide ID:NM_021813Re-query CCDS DB by Protein ID:NP_068585Link to BLAST:NP_068585.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164265.1 841 Q9BYV9 841 100% 0 0
NP_068585.1 841 Q9BYV9 841 100% 0 0

Chromosomal Locations for CCDS 5026.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 89932408 89932890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89938144 89938350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89950270 89951862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 90008602 90008844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGTCTGTGGATGAGAAGCCTGACTCCCCCATGTATGTGTATGAGTCCACAGTCCACTGCACCAACATCC
TC
CTGGGCCTCAATGACCAGCGGAAAAAGGATATTCTCTGTGACGTGACTTTGATCGTGGAGAGGAAGGA
G
TTCCGGGCCCACCGGGCTGTGCTGGCCGCATGCAGTGAATATTTTTGGCAGGCGCTGGTTGGACAGACA
AAA
AATGATTTGGTGGTCAGCTTGCCTGAGGAGGTCACAGCCAGGGGCTTTGGGCCGCTGTTACAGTTTG
CC
TACACTGCCAAGCTGTTACTCAGCAGAGAAAACATCCGCGAGGTCATCCGCTGTGCTGAGTTCCTGCG
C
ATGCACAACCTGGAGGACTCCTGCTTCAGCTTCCTGCAGACCCAGCTCCTGAACAGTGAGGATGGCCTG
TTT
GTGTGCCGGAAGGATGCTGCGTGCCAGCGCCCACACGAGGACTGCGAGAACTCTGCAGGAGAGGAGG
AG
GATGAAGAGGAGGAGACGATGGATTCAGAGACGGCCAAGATGGCTTGCCCCAGGGACCAGATGCTTCC
A
GAGCCCATCAGCTTTGAGGCCGCCGCCATCCCCGTAGCAGAGAAGGAAGAAGCCCTGCTGCCCGAGCCT
GAC
GTGCCCACAGACACCAAGGAGAGCTCAGAAAAGGACGCGTTAACGCAGTACCCCAGATACAAGAAAT
AC
CAGCTTGCATGTACCAAGAATGTCTATAATGCATCATCACACAGTACCTCAGGTTTTGCAAGCACATT
C
CGGGAAGATAACTCTAGCAACAGCCTCAAGCCGGGGCTTGCCAGGGGGCAGATTAAAAGTGAGCCGCCC
AGT
GAAGAGAATGAGGAAGAGAGCATCACGCTCTGCCTGTCTGGAGATGAGCCTGACGCCAAGGACAGAG
CG
GGGGATGTCGAGATGGACCGGAAACAGCCCAGCCCTGCCCCTACCCCCACGGCCCCAGCTGGGGCCGC
C
TGCCTGGAGAGATCCAGGAGCGTGGCCTCGCCCTCCTGCTTAAGGTCTCTGTTCAGCATAACGAAAAGT
GTG
GAGCTGTCTGGCCTGCCCAGTACATCTCAGCAGCACTTTGCCAGGAGTCCAGCCTGCCCTTTTGACA
AG
GGGATCACTCAGGGTGACCTTAAAACTGACTACACCCCTTTCACAGGGAATTATGGACAGCCCCACGT
G
GGCCAGAAGGAGGTGTCCAACTTCACCATGGGGTCGCCCCTCAGGGGGCCTGGGTTGGAGGCTCTCTGT
AAA
CAGGAGGGAGAGCTGGACCGGAGGAGCGTGATCTTCTCCTCCAGCGCTTGTGACCAAGTGAGCACCT
CG
GTGCATTCTTATTCTGGGGTGAGCAGTTTGGACAAAGACCTCTCTGAGCCGGTGCCAAAGGGTCTGTG
G
GTGGGAGCCGGCCAGTCCCTCCCCAGCTCGCAGGCCTACTCCCACGGTGGGCTGATGGCCGACCACTTG
CCA
GGAAGGATGCGGCCCAACACCAGCTGCCCGGTACCAATCAAAGTCTGCCCTCGCTCACCCCCCTTGG
AG
ACCAGGACCAGGACTTCCAGCTCCTGCTCTTCCTATTCCTACGCGGAGGACGGGAGCGGGGGCTCACC
C
TGCAGCCTCCCTCTCTGTGAGTTCTCCTCCTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACAGAA
CAT
CAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTGCGGCCCCAAATTAAATGTGAGCAGT
CT
TATGGAACCAACTCCAGTGACGAATCCGGATCGTTCTCGGAAGCAGACAGTGAGTCGTGTCCTGTGCA
G
GACAGGGGCCAGGAGGTAAAACTTCCTTTTCCTGTAGATCAAATCACAGATCTTCCAAGGAACGATTTC
CAG
ATGATGATTAAAATGCACAAGCTAACCTCAGAACAGTTAGAGTTTATTCATGATGTCCGACGGCGCA
GC
AAGAACCGCATCGCGGCCCAGCGCTGCCGCAAAAGGAAACTGGACTGTATTCAGAATTTAGAATGTGA
A
ATCCGCAAATTGGTGTGTGAGAAAGAGAAACTGTTGTCAGAGAGGAATCAACTGAAAGCATGCATGGGG
GAA
CTGTTGGACAACTTCTCCTGCCTTTCCCAGGAAGTTTGCCGAGACATCCAGAGCCCCGAGCAGATCC
AG
GCCCTGCATCGGTATTGCCCTGTCCTCAGACCCATGGACTTGCCCACGGCCTCCAGTATTAACCCTGC
G
CCCTTGGGTGCTGAGCAGAACATTGCGGCCTCCCAATGCGCAGTGGGGGAAAACGTGCCCTGCTGCTTG
GAG
CCAGGCGCGGCTCCCCCCGGACCCCCCTGGGCACCCAGCAACACCTCCGAGAATTGTACCTCTGGGA
GG
AGACTAGAAGGCACTGACCCGGGAACCTTCTCAGAGAGAGGACCTCCTCTTGAACCCAGGAGCCAAAC
A
GTGACCGTGGACTTCTGCCAGGAAATGACTGATAAGTGTACAACTGACGAACAGCCCAGGAAAGATTAT
ACC
TAG


Translation (841 aa):
MSVDEKPDSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQT
K
NDLVVSLPEE
VTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFLQTQLLNSEDGL
F
VCRKDAACQRPHEDCENSAGEEEDEEEETMDSETAKMACPRDQMLPEPISFEAAAIPVAEKEEALLPEP
D
VPTDTKESSEKDALTQYPRYKKYQLACTKNVYNASSHSTSGFASTFREDNSSNSLKPGLARGQIKSEPP
S
EENEEESITLCLSGDEPDAKDRAGDVEMDRKQPSPAPTPTAPAGAACLERSRSVASPSCLRSLFSITKS
V
ELSGLPSTSQQHFARSPACPFDKGITQGDLKTDYTPFTGNYGQPHVGQKEVSNFTMGSPLRGPGLEALC
K
QEGELDRRSVIFSSSACDQVSTSVHSYSGVSSLDKDLSEPVPKGLWVGAGQSLPSSQAYSHGGLMADHL
P
GRMRPNTSCPVPIKVCPRSPPLETRTRTSSSCSSYSYAEDGSGGSPCSLPLCEFSSSPCSQGARFLATE
H
QEPGLMGDGMYNQVRPQIKCEQSYGTNSSDESGSFSEADSESCPVQDRGQE
VKLPFPVDQITDLPRNDF
Q
MMIKMHKLTSEQLEFIHDVRRRSKNRIAAQRCRKRKLDCIQNLECEIRKL
VCEKEKLLSERNQLKACMG
E
LLDNFSCLSQEVCRDIQSPEQIQALHRYCPVLRPMDLPTASSINPAPLGAEQNIAASQCAVGENVPCCL
E
PGAAPPGPPWAPSNTSENCTSGRRLEGTDPGTFSERGPPLEPRSQTVTVDFCQEMTDKCTTDEQPRKDY
T




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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