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Report for CCDS12588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12588.1 Public Homo sapiens 19 RPS19 24 110 108 CCDS HistoryNCBI Gene:6223Re-query CCDS DB by CCDS ID:12588.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000600467.6 ENSP00000469228.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600467.6Link to Ensembl Protein Viewer:ENSP00000469228.2Re-query CCDS DB by Nucleotide ID:ENST00000600467Re-query CCDS DB by Protein ID:ENSP00000469228
Original member Current member EBI ENST00000593863.5 ENSP00000470004.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593863.5Link to Ensembl Protein Viewer:ENSP00000470004.1Re-query CCDS DB by Nucleotide ID:ENST00000593863Re-query CCDS DB by Protein ID:ENSP00000470004
Original member Current member EBI ENST00000598742.6 ENSP00000470972.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598742.6Link to Ensembl Protein Viewer:ENSP00000470972.1Re-query CCDS DB by Nucleotide ID:ENST00000598742Re-query CCDS DB by Protein ID:ENSP00000470972
Original member Current member NCBI NM_001022.4 NP_001013.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001022.4Link to Protein Sequence:NP_001013.1Re-query CCDS DB by Nucleotide ID:NM_001022Re-query CCDS DB by Protein ID:NP_001013Link to BLAST:NP_001013.1
Original member Current member NCBI NM_001321483.2 NP_001308412.1 Accepted alive Link to Nucleotide Sequence:NM_001321483.2Link to Protein Sequence:NP_001308412.1Re-query CCDS DB by Nucleotide ID:NM_001321483Re-query CCDS DB by Protein ID:NP_001308412Link to BLAST:NP_001308412.1
Original member Current member NCBI NM_001321484.2 NP_001308413.1 Accepted alive Link to Nucleotide Sequence:NM_001321484.2Link to Protein Sequence:NP_001308413.1Re-query CCDS DB by Nucleotide ID:NM_001321484Re-query CCDS DB by Protein ID:NP_001308413Link to BLAST:NP_001308413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013.1 145 P39019 145 100% 0 0
NP_001308412.1 145 P39019 145 100% 0 0
NP_001308413.1 145 P39019 145 100% 0 0

Chromosomal Locations for CCDS 12588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 41860775 41860845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41861112 41861212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41869031 41869214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41869699 41869753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41871351 41871377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGCCTGGAGTTACTGTAAAAGACGTGAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAA
AGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCACAAAGAGCTTGCTCC
CTACGATGAGAACTGGTTCTACACGCGAGCTGCTTCCACAGCGCGGCACCTGTACCTCCGGGGTGGCGCT
GGGGTTGGCTCCATGACCAAGATCTATGGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCC
GAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCA
AGATGGCGGCCGCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTGGCAGCT
GCCAACAAGAAGCATTAG

Translation (145 aa):
MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA
GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA
ANKKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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