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Report for CCDS27395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27395.1 Public Mus musculus 15 Acot10 23 108 98 CCDS HistoryNCBI Gene:64833Re-query CCDS DB by CCDS ID:27395.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27395.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052910.5 ENSMUSP00000051333.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052910.5Link to Ensembl Protein Viewer:ENSMUSP00000051333.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000052910Re-query CCDS DB by Protein ID:ENSMUSP00000051333
Original member Current member NCBI NM_022816.2 NP_073727.2 Accepted alive Link to Nucleotide Sequence:NM_022816.2Link to Protein Sequence:NP_073727.2Re-query CCDS DB by Nucleotide ID:NM_022816Re-query CCDS DB by Protein ID:NP_073727Link to BLAST:NP_073727.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073727.2 439 Q32MW3 439 100% 0 0

Chromosomal Locations for CCDS 27395.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 20665334 20666653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGAAGCGGGCAGCGATGAGGCTTTGGACCTTGAACAAGGGGCTTCTTACTCATGGCAGAGGACTATCTC
AAGGATCCCAATACAAAATAAGTGAACCCTTACACATCCATCAAGTTCAAGTCAAGCTGCGGGAGATAGT
AGGTATTTCCACAGTCTGGAGAGACCATGTACAAGCAATGGAGGAAAGGAAGTTACTTCATAGTTTTTTG
CCTAAATCACAGAAAGTCCTACCACCGAGGAAAATAAGGGATAGTTACATTGAAGTTCTCCTACCTTTGG
GTACTGACCCTGAACTACGAGACAAATATGTGACTGTTCAAAATACAGTAAGATTTGGCAGGATTCTTGA
GGACCTTGACAGCTTAGGAGTTCTTGTTTGCTACATGCACAACCACAATCATTCTACCAATATGTCTCTT
TTATCAATAGTTACAGTCCTGGTGGACAAGATTGATATGTGTAAACACAGCTTAAGCCCTGAACAGGACA
TTAAGTTCACTGGCCATGTTAGCTGGGTTGGAAATACAACCATGGAAGTGAAGATGAAAATGTTCCAGCT
GCACGATGATGAGACATATTGGCCTGTTTTGGATGCAACCTTTGTAATGGTGGCTCAAGATTCTGAAAAT
AAGAGGCCGGCATTTGTAAATCCACTCATTCCGGAAAATAAAGAAGAAGAAGAGCTCTTTACACAAGGAG
AATTGAACAAGAGCCGAAGGATTGCCTTTAGCACCAGTTCATTACTGAAAGTGGCTCCCAGTTCTGAGGA
GAGGAATATCATACATGAACTGTTTCTTAGCACACTGGATCCAAAGACTATAAGTTTTCAGAGTCGAATT
TTGCCTCCTAAGGCAGTGTGGATGGAGGATACAAAACTCAAGAGCTTGGATATTTGTCACCCTCAGGAAC
GAAATGTATTCAATCGGATCTTTGGTGGTTTTCTTATGAGAAAAGCATATGAACTTGCATGGGCTACTGC
TTGTAGCTTTGGAGGTTCTCGGCCATATGTGGTAACAGTAGATGATATCATGTTTCAGAAGCCTGTTGAA
GTTGGTTCATTGCTCTTTCTTTCTTCACAGGTATGCTTCACCCAGGGTAATTACATTCAAGTCAGAGTCC
ATAGTGAAGTGTTCTCTCTTGACAGTCGTGAGCATATGACCACCAATGTCTTTCATTTTACATTCATGTC
AGAAAAAGAAGTACCCTTGATTTTCCCTAAAACATATGGAGAGTCCATGTTGTATTTAGATGGACAGCGA
CATTTCAAGTCTATGAGTACCCCAGTAACCTTAAAAAAGGACTACCCTGTGGAACCCTAG

Translation (439 aa):
MKRAAMRLWTLNKGLLTHGRGLSQGSQYKISEPLHIHQVQVKLREIVGISTVWRDHVQAMEERKLLHSFL
PKSQKVLPPRKIRDSYIEVLLPLGTDPELRDKYVTVQNTVRFGRILEDLDSLGVLVCYMHNHNHSTNMSL
LSIVTVLVDKIDMCKHSLSPEQDIKFTGHVSWVGNTTMEVKMKMFQLHDDETYWPVLDATFVMVAQDSEN
KRPAFVNPLIPENKEEEELFTQGELNKSRRIAFSTSSLLKVAPSSEERNIIHELFLSTLDPKTISFQSRI
LPPKAVWMEDTKLKSLDICHPQERNVFNRIFGGFLMRKAYELAWATACSFGGSRPYVVTVDDIMFQKPVE
VGSLLFLSSQVCFTQGNYIQVRVHSEVFSLDSREHMTTNVFHFTFMSEKEVPLIFPKTYGESMLYLDGQR
HFKSMSTPVTLKKDYPVEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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