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Report for CCDS36258.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36258.1 Public Mus musculus 11 Wfdc21 23 108 98 CCDS HistoryNCBI Gene:66107Re-query CCDS DB by CCDS ID:36258.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36258.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070832.2 ENSMUSP00000064479.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070832.2Link to Ensembl Protein Viewer:ENSMUSP00000064479.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000070832Re-query CCDS DB by Protein ID:ENSMUSP00000064479
Original member Current member NCBI NM_183249.2 NP_899072.1 Accepted alive Link to Nucleotide Sequence:NM_183249.2Link to Protein Sequence:NP_899072.1Re-query CCDS DB by Nucleotide ID:NM_183249Re-query CCDS DB by Protein ID:NP_899072Link to BLAST:NP_899072.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899072.1 63 Q8BTE6 63 100% 0 0

Chromosomal Locations for CCDS 36258.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 83747027 83747123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83749233 83749327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (192 nt):
ATGAAGCTAGGAGCCTTCCTTCTGTTGGTGTCCCTCATCACCCTCAGCCTAGAGGTACAGGAGCTGCAGG
CTGCAGTGAGACCTCTGCAGCTTTTAGGCACCTGTGCTGAGCTCTGCCGTGGTGACTGGGACTGTGGGCC
AGAGGAACAATGTGTCAGTATTGGATGCAGTCACATCTGTACTACAAACTAA

Translation (63 aa):
MKLGAFLLLVSLITLSLEVQELQAAVRPLQLLGTCAELCRGDWDCGPEEQCVSIGCSHICTTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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