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Report for CCDS37131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37131.1 Public Mus musculus 15 Ift27 23 108 98 CCDS HistoryNCBI Gene:67042Re-query CCDS DB by CCDS ID:37131.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37131.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016781.7 ENSMUSP00000016781.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016781.7Link to Ensembl Protein Viewer:ENSMUSP00000016781.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000016781Re-query CCDS DB by Protein ID:ENSMUSP00000016781
Original member Current member NCBI NM_025931.3 NP_080207.1 Accepted alive Link to Nucleotide Sequence:NM_025931.3Link to Protein Sequence:NP_080207.1Re-query CCDS DB by Nucleotide ID:NM_025931Re-query CCDS DB by Protein ID:NP_080207Link to BLAST:NP_080207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080207.1 186 Q9D0P8 186 100% 0 0

Chromosomal Locations for CCDS 37131.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78159610 78159708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78164190 78164299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78165147 78165264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78165974 78166033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78167070 78167129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78167913 78167992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78173769 78173802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGTGAAGCTAGCTGCCAAATGCATCCTGGCAGGGGACCCAGCCGTAGGCAAGACGGCCCTGGTGCAGA
TGTTCCGCAGCGACGGGACCCATTTCCAGAAGAACTACACCCTGACAACTGGAGTGGATTTGGTGGTGAA
GACAGTGCCAGTTCTTGACACAAATGACAGTGTGGAACTCTTCATTTTTGACTCAGCCGGCAAGGAGCTG
TTCTCTGAAATGCTGGATAAGTTGTGGGAGAATCCCAACGTCCTGTGCCTTGTCTATGATGTGACCAATG
AACAGTCCTTCATCAGCTGCACCAAGTGGTTGGAGAAGGTCCGGTCTCAGACTTCAGGCATCTCCCTCCC
AGGTGTTTTAGTGGGAACTAAGACAGACCTGGCTGGCCGACAAACAGTGGATTCAGCTCAGGCCCAGGTA
TGGGCACTGAGTCAAGGCCTGGAATTCTTTGAGACATCTGTGAAGGAGATGGATAATTACGAGGCCCCGT
TCCACTGTCTGGCCAAGCAGTTCTACCAGCTGTACCGGGAAAAAGTGGACATATTCCATACCCTGGTGTG
A

Translation (186 aa):
MVKLAAKCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKEL
FSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRSQTSGISLPGVLVGTKTDLAGRQTVDSAQAQV
WALSQGLEFFETSVKEMDNYEAPFHCLAKQFYQLYREKVDIFHTLV


Links Key
 Links to:   History report
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