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Report for CCDS30011.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30011.1 Public Mus musculus X Dynlt3 23 108 98 CCDS HistoryNCBI Gene:67117Re-query CCDS DB by CCDS ID:30011.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30011.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033519.2 ENSMUSP00000033519.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033519.2Link to Ensembl Protein Viewer:ENSMUSP00000033519.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000033519Re-query CCDS DB by Protein ID:ENSMUSP00000033519
Original member Current member NCBI NM_025975.5 NP_080251.3 Accepted alive Link to Nucleotide Sequence:NM_025975.5Link to Protein Sequence:NP_080251.3Re-query CCDS DB by Nucleotide ID:NM_025975Re-query CCDS DB by Protein ID:NP_080251Link to BLAST:NP_080251.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080251.3 116 P56387 116 100% 0 0

Chromosomal Locations for CCDS 30011.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 9655987 9656063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9656380 9656457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9657041 9657164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9660980 9661021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9662869 9662898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGAGGGGTACCAACGGCCCTGCGATGAGGTTGGCTTCAATGCTGATGAAGCCCATAATATAGTCAAAG
AGTGTGTTGATGGAGTTTTGGGTGGTAACGATTATAATGAGAATAACATCAACCAATGGACTGCAAGCAT
AGTGGAACAGTCTATAACACATTTGGTCAAACTGGGGAAAGCTTACAAGTACATTGTGACCTGTGCAGTG
GTCCAGAGGAGCCCGTATGGATTTCACACAGCCAGCTCCTGTTTTTGGGATACAACATCTGATGGAACCT
GTACCATCAGATGGGAGAACCGTACCATGAACTGCATCGTGAATGTTTTTGCAGTTGCGATTGTCCTGTA
G

Translation (116 aa):
MEGYQRPCDEVGFNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAV
VQRSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVAIVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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