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Report for CCDS27155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27155.1 Public Mus musculus 14 Cryl1 23 108 98 CCDS HistoryNCBI Gene:68631Re-query CCDS DB by CCDS ID:27155.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022517.8 ENSMUSP00000022517.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022517.8Link to Ensembl Protein Viewer:ENSMUSP00000022517.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022517Re-query CCDS DB by Protein ID:ENSMUSP00000022517
Original member Current member NCBI NM_030004.3 NP_084280.2 Accepted alive Link to Nucleotide Sequence:NM_030004.3Link to Protein Sequence:NP_084280.2Re-query CCDS DB by Nucleotide ID:NM_030004Re-query CCDS DB by Protein ID:NP_084280Link to BLAST:NP_084280.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084280.2 319 Q99KP3 319 100% 0 0

Chromosomal Locations for CCDS 27155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 57275449 57275562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57275917 57276023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57286365 57286470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57303593 57303787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57312968 57313129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57362922 57363048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57382758 57382865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57398408 57398448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGCGTCCCCAGCAGCGGGCGGGGTGGTGATCGTAGGCAGTGGGCTCATTGGTCGGAGCTGGGCTATGC
TGTTTGCCAGTGGAGGCTTCAAGGTGAAACTCTATGACATTGAGCAACAGCAGATAACAGACGCCCTGGA
AAATATCAGGAAGGAGATGAAATCCCTGGAGCAGTCTGGTTCTCTCAAAGGCTCCTTGAGCGCAGAGCGG
CAGCTGTCTCTCATCAGTGGCTGTGGCAACCTGGCCGAAGCAGTAGAGGGCGCTGTGCACATTCAGGAGT
GTGTTCCAGAGAACCTAGAACTGAAAAAGAAGATCTTTGCCCAGCTGGACCGCATTGTGGATGACCGGGT
TATCCTAAGCAGCTCCAGCTCTTGTCTGCTGCCTTCCAAGCTGTTCTCGGGCTTGGCTCATGTGAAGCAG
TGCATTGTGGCTCATCCTGTCAATCCACCATATTATGTCCCCCTGGTTGAGCTAGTGCCCCACCCAGAGA
CAGCTCCAGCCACAATGGACAGAACCTATGCCTTGATGAAGAAGATTGGGCAGTCCCCAGTGAGAGTCCT
GAAGGAGATTGACGGCTTCGTCCTGAACCGCCTGCAGTACGCCGTCATCAGTGAGGCCTGGAGACTGGTG
GAGGAAGAAATAGTATCTCCTAGCGACCTAGACCTGGTCATGTCAGACGGGCTGGGCATGCGGTACGCGT
TCATCGGACCCTTGGAGACTATGCACCTCAATGCTGAAGGTGTGATTAGCTACTGTGAGAGATACAGTGA
AGGGATGAAGCACGTCCTCAGTACTTTCGGGCCTGTTCCAGAGTTCTCAGGGGCCACGGTGGAGAGAGTT
AGTGAGGACATGTGCATGAAGGTTCCTGATGATCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACG
ACTGCCTCATGAAGCTCTCCATACTGAAGTACCAGATGCAGCCCAAGTGA

Translation (319 aa):
MASPAAGGVVIVGSGLIGRSWAMLFASGGFKVKLYDIEQQQITDALENIRKEMKSLEQSGSLKGSLSAER
QLSLISGCGNLAEAVEGAVHIQECVPENLELKKKIFAQLDRIVDDRVILSSSSSCLLPSKLFSGLAHVKQ
CIVAHPVNPPYYVPLVELVPHPETAPATMDRTYALMKKIGQSPVRVLKEIDGFVLNRLQYAVISEAWRLV
EEEIVSPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGVISYCERYSEGMKHVLSTFGPVPEFSGATVERV
SEDMCMKVPDDPEHLAARRQWRDDCLMKLSILKYQMQPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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