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Report for CCDS22069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22069.1 Public Mus musculus 8 Mcemp1 23 108 98 CCDS HistoryNCBI Gene:69189Re-query CCDS DB by CCDS ID:22069.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22069.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014118.3 ENSMUSP00000014118.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014118.3Link to Ensembl Protein Viewer:ENSMUSP00000014118.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000014118Re-query CCDS DB by Protein ID:ENSMUSP00000014118
Original member NCBI NM_026985.1 NP_081261.1 Updated not alive Link to Nucleotide Sequence:NM_026985.1Link to Protein Sequence:NP_081261.1Re-query CCDS DB by Nucleotide ID:NM_026985Re-query CCDS DB by Protein ID:NP_081261
Current member NCBI NM_026985.2 NP_081261.1 Accepted alive Link to Nucleotide Sequence:NM_026985.2Link to Protein Sequence:NP_081261.1Re-query CCDS DB by Nucleotide ID:NM_026985Re-query CCDS DB by Protein ID:NP_081261Link to BLAST:NP_081261.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081261.1 183 Q9D8U6 183 100% 0 0

Chromosomal Locations for CCDS 22069.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 3665782 3665836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3666052 3666141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3667006 3667137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3667260 3667310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3667399 3667554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3668192 3668245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3668332 3668345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGCATGCATCAGCCTCCCAGGATAAGAACCGGAGGAAGCCAGGTCATGATGAAGGTGCTCACAATCCTG
AC
TACGAGAATATAACCTTGGCCTTCAGAAACAAGGACCAACTCAAACTCAGCCAATCAACACCCACAAA
A
CAAGCCAAGTTCAAGACATCCCTGGACCCAGCTGAGTCCCCGCCTTGGTTGTACAGAACCATTATGATG
TTG
TATGTTCTCCTTGCTCTCGTCTTTTTATCCTGCATCGTCCTCTCTGCTTTGGTCTTGGTGAAAAATT
CT
GAGATGTCCAAGGAGCTGTGGACCTTGAAAGCAGAGCTTTCGAATGTTTCAGACACGGTGTGGAATAT
C
CGGGAGCTCCAGAATCAGCAAACGAGGATTTGGGAAGCTGCCCAGGGGGACATCAAGGAGGTCAAGAAG
ACC
CTTGGCACAGTCATGAGTAGCATCCAGACTGGAAACGACCGGCTGAAGACTGTGCCGGCAGATATAA
CC
CAAATCAAGAAAACTCTTGAGGCGCTAGAAAAGAAGGCACAGCCTCAGCCCAGTACATAA


Translation (183 aa):
MHASASQDKNRRKPGHDEGAHNPDYENITLAFRNKDQLKLSQSTPTKQAKFKTSLDPAESPPWLYRTIMM
L
YVLLALVFLSCIVLSALVLVK
NSEMSKELWTLKAELSNVSDTVWNIRELQNQQTRIWEAAQGDIKEVKK
T
LGTVMSSIQTGNDRLKTVPA
DITQIKKTLEALEKKAQPQPST



Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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