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Report for CCDS22356.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22356.1 Public Mus musculus 8 Sugp1 23 108 98 CCDS HistoryNCBI Gene:70616Re-query CCDS DB by CCDS ID:22356.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22356.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000011450.7 ENSMUSP00000011450.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000011450.7Link to Ensembl Protein Viewer:ENSMUSP00000011450.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000011450Re-query CCDS DB by Protein ID:ENSMUSP00000011450
Original member Current member NCBI NM_001368391.1 NP_001355320.1 Accepted alive Link to Nucleotide Sequence:NM_001368391.1Link to Protein Sequence:NP_001355320.1Re-query CCDS DB by Nucleotide ID:NM_001368391Re-query CCDS DB by Protein ID:NP_001355320Link to BLAST:NP_001355320.1
Original member Current member NCBI NM_027481.3 NP_081757.1 Accepted alive Link to Nucleotide Sequence:NM_027481.3Link to Protein Sequence:NP_081757.1Re-query CCDS DB by Nucleotide ID:NM_027481Re-query CCDS DB by Protein ID:NP_081757Link to BLAST:NP_081757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355320.1 643 Q8CH02 643 100% 0 0
NP_081757.1 643 Q8CH02 643 100% 0 0

Chromosomal Locations for CCDS 22356.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70043047 70043080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70048509 70048680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70052591 70052691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70056386 70056604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70059282 70059405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70059753 70059853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70060536 70060659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70064837 70065198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70069452 70069558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70069996 70070173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70070331 70070437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70071114 70071259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70071522 70071651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70071806 70071832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1932 nt):
ATGAGTCTCAAGATGGACAACCGGGATGTTGCAGGAAAGGCCAATCGGTGGTTTGGGATGGCACAACCCA
AG
TCTGGAAAGATGAATATGAACATCCTCCACCAGGAAGAGCTTATTGCTCAGAAGAAGCGGGAGATTGA
G
GCCAGAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTCATCCTGGAGAAATT
GCT
GATGCACATAACTCCTGCATCTCCAACAAGTTTGCCAATGATGGCAGCTTCCTGCAGCAGTTTCTGA
AG
TTACAGAAGGCACAGACAAGCACAGATTCAGCCCCCAGGGCCCCTCCCAGCATGCCAACACCCAGCTC
C
TTGAAGAAACCCCTTGTGCTCAGCAAGCGAACAGGCCTGGGACTGAGTAGCCCAACGGGTCCTGTGAAG
AAC
TACTCACATGCCAAACAGCTGCCTGTTGCACACCGCCCGAGTGTCTTCCAGTCCCCTGATGATGATG
AG
GAGGAGGACTATGAGCAGTGGCTGGAAATCAAAGTTTCACCCCCAGAGGGAGCCGAGACTCGGAGAGT
G
ATAGAGAAGCTGGCCCGTTTTGTGGCAGAAGGAGGCCCCGAGCTAGAGAAAGTAGCTATGGAGGACTAC
AAG
GATAACCCGGCCTTCACATTTTTACATGATAAGAATAGCAGGGAATTCCTGTACTACAGAAGGAAGG
TA
GCCGAGATCAGGAAAGAAGCCCAAAAGCCACAGGCAGCCACCCAGAAAGTTTCACCCCCAGAGGATGA
A
GAGGCCAAGAACCTTGCAGAAAAGTTGGCCAGGTTCATAGCAGACGGGGGTCCAGAAGTGGAGACCATC
GCC
CTCCAGAACAACCGTGAGAATCAGGCCTTCAGTTTTCTCTATGATCCCAACAGCCAAGGGTACAGAT
AC
TACAGGCAAAAGCTAGATGAGTTCCGGAAAGCCAAGGCGGGCTCCACAGGCTCCTTCCCTGCTCCTGC
T
CCCAACCCCAGCCTGCGGCGAAAGTCTGCCCCAGAAGCCCTGTCAGGGGCTGTGCCCCCCATCACTGCC
TGC
CCCACTCCAGTGGCCCCAGCACCTGCTGTCAACCCCACTCCATCCATCCCTGGGAAGCCCACCGCCA
CA
GCCGCTGTGAAGAGGAAGCGGAAGAGCCGGTGGGGGCCTGAAGAGGACAAAGTGGAGCTTCCACCTGC
T
GAACTGGCACAGAGGGACATAGATGCCTCACCTTCACCTCTTTCAGTTCAGGATCTCAAAGGGCTTGGC
TAT
GAGAAGGGGAAACCTGTGGGCCTGGTGGGTGTCACAGAGCTGTCTGATGCACAAAAGAAGCAGCTGA
AG
GAGCAGCAGGAGATGCAGCAGATGTATGACATGATTATGCAGCACAAGCGCGCCATGCAAGACATGCA
G
CTTCTGTGGGAGAAGGCGCTGCAGCAACACCAGCATGGCTATGACAGTGATGAGGAGGTAGACAGTGAA
CTG
GGCACCTGGGAGCACCAGCTGCGACGCATGGAGATGGACAAGACACGGGAGTGGGCAGAGCAGCTGA
CA
CAGATGGGTCGGGGCAAGCACTTCATCGGTGACTTTCTGCCCCCTGATGAGCTGGAGAAGTTCATGGA
G
ACCTTCAAGGCCCTGAAGGAGGGCAGAGAGCCAGACTACTCAGAATATAAGGAGTTTAAGCTGACGGTG
GAA
AACATTGGCTACCAGATGCTCATGAAGATGGGCTGGAAAGAGGGCGAGGGGCTGGGCACTGAGGGCC
AG
GGCATCAAGAACCCAGTGAACAAGGGTGCCACCACAATAGATGGAGCTGGCTTTGGCATCGACCGGCC
A
GCTGAACTCTCCAAGGAGGATGATGAGTACGAGGCCTTCCGCAAGAGGATGATGCTGGCCTACCGATTC
CGG
CCCAACCCGCTGAACAACCCCAGACGGCCCTACTACTGA


Translation (643 aa):
MSLKMDNRDVAGKANRWFGMAQPKSGKMNMNILHQEELIAQKKREIEARMEQKARQSHVPSPQPPHPGEI
A
DAHNSCISNKFANDGSFLQQFLKLQKAQTST
DSAPRAPPSMPTPSSLKKPLVLSKRTGLGLSSPTGPVK
N
YSHAKQLPVAHRPSVFQSPDDDEEEDYEQWLEIK
VSPPEGAETRRVIEKLARFVAEGGPELEKVAMEDY
K
DNPAF
TFLHDKNSREFLYYRRKVAEIRKEAQKPQAATQKVSPPEDEEAKNLAEKLARFIADGGPEVETI
A
LQNNRENQAF
SFLYDPNSQGYRYYRQKLDEFRKAKAGSTGSFPAPAPNPSLRRKSAPEALSGAVPPITA
C
PTPVAPAPAVNPTPSIPGKPTATAAVKRKRKSRWGPEEDKVELPPAELAQRDIDASPSPLS
VQDLKGLG
Y
EKGKPVGLVGVTELSDAQKKQLKEQQE
MQQMYDMIMQHKRAMQDMQLLWEKALQQHQHGYDSDEEVDSE
L
GTWEHQLRRMEMDKTR
EWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTV
E
NIGYQMLMKMGWKEGEGLGTEGQGIKNPVN
KGATTIDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRF
R
PNPL
NNPRRPYY



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser