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Report for CCDS52602.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52602.1 Public Mus musculus 8 Rasd2 23 108 98 CCDS HistoryNCBI Gene:75141Re-query CCDS DB by CCDS ID:52602.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52602.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000139848.7 ENSMUSP00000118070.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000139848.7Link to Ensembl Protein Viewer:ENSMUSP00000118070.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000139848Re-query CCDS DB by Protein ID:ENSMUSP00000118070
Original member Current member EBI ENSMUST00000132133.1 ENSMUSP00000120717.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000132133.1Link to Ensembl Protein Viewer:ENSMUSP00000120717.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000132133Re-query CCDS DB by Protein ID:ENSMUSP00000120717
Original member Current member NCBI NM_029182.1 NP_083458.1 Accepted alive Link to Nucleotide Sequence:NM_029182.1Link to Protein Sequence:NP_083458.1Re-query CCDS DB by Nucleotide ID:NM_029182Re-query CCDS DB by Protein ID:NP_083458Link to BLAST:NP_083458.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083458.1 266 P63032 266 100% 0 0

Chromosomal Locations for CCDS 52602.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 75218545 75218815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 75221719 75222248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGATGAAGACCTTGTCCAGTGGGAACTGCACACTCAATGTGCCTGCTAAGAACTCCTACCGCATGGTGG
TGCTGGGTGCCTCCCGAGTGGGCAAGAGCTCCATTGTCTCCCGCTTCCTCAATGGCCGCTTTGAGGACCA
GTACACGCCCACTATCGAGGACTTTCATCGCAAGGTGTACAACATCCACGGGGACATGTACCAGCTGGAT
ATCCTGGACACCTCTGGCAACCACCCATTCCCTGCCATGCGCCGGCTCTCCATCCTCACAGGAGATGTCT
TCATCCTGGTGTTCAGCCTGGATAGCCGGGAGTCCTTTGATGAGGTCAAGCGCCTCCAGAAACAGATCCT
GGAGGTCAAGTCCTGCCTGAAGAATAAAACCAAGGAGGCAGCAGAGCTGCCCATGGTGATCTGTGGGAAC
AAGAATGACCACAGTGAGCTGTGCCGCCAGGTCCCTGCCATGGAGGCTGAGCTGCTGGTGTCTGGTGATG
AAAACTGCGCCTACTTCGAGGTGTCAGCCAAGAAGAACACTAATGTGAATGAGATGTTCTATGTGCTGTT
CAGCATGGCCAAGCTGCCCCATGAGATGAGCCCTGCACTGCACCATAAGATCTCCGTGCAGTACGGCGAT
GCTTTTCACCCCCGGCCCTTCTGCATGCGTCGCACTAAGGTCGCAGGTGCCTATGGCATGGTCTCACCCT
TTGCCCGACGCCCCAGTGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTACGGGAGGGCCAGGC
CCGAGAGAGGGACAAGTGTAGCATCCAGTGA

Translation (266 aa):
MMKTLSSGNCTLNVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHGDMYQLD
ILDTSGNHPFPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICGN
KNDHSELCRQVPAMEAELLVSGDENCAYFEVSAKKNTNVNEMFYVLFSMAKLPHEMSPALHHKISVQYGD
AFHPRPFCMRRTKVAGAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCSIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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