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Report for CCDS183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
183.1 Public Homo sapiens 1 ACTL8 24 110 108 CCDS HistoryNCBI Gene:81569Re-query CCDS DB by CCDS ID:183.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375406.2 ENSP00000364555.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375406.2Link to Ensembl Protein Viewer:ENSP00000364555.1Re-query CCDS DB by Nucleotide ID:ENST00000375406Re-query CCDS DB by Protein ID:ENSP00000364555
Original member Current member EBI ENST00000617065.1 ENSP00000481590.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617065.1Link to Ensembl Protein Viewer:ENSP00000481590.1Re-query CCDS DB by Nucleotide ID:ENST00000617065Re-query CCDS DB by Protein ID:ENSP00000481590
Original member Current member NCBI NM_030812.3 NP_110439.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030812.3Link to Protein Sequence:NP_110439.2Re-query CCDS DB by Nucleotide ID:NM_030812Re-query CCDS DB by Protein ID:NP_110439Link to BLAST:NP_110439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110439.2 366 Q9H568 366 100% 0 0

Chromosomal Locations for CCDS 183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 17823009 17823356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 17825767 17826519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGGCTGCAAGAACCGTTATCATTGACCACGGGTCTGGCTTTTTGAAGGCTGGCACGGCCGGCTGGAATG
AGCCTCAGATGGTCTTCCCGAACATCGTGAACTACCTACCGTGCAAGGAGAACCCTGGCCCCAGCTATGC
CCGTAGGCGTGTGAGCCTGGGCATCGACATTTGCCATCCTGACACCTTTAGCTACCCCATCGAGCGGGGC
CGCATCCTCAACTGGGAGGGTGTGCAGTACCTCTGGTCATTTGTGTTGGAGAACCACAGACGGGAGCAAG
AGGTCCCCCCTGTGATCATCACGGAGACACCCTTGAGGGAGCCTGCGGACCGAAAGAAGATGCTGGAGAT
CCTGTTTGAGTTGCTGCATGTCCCATCGGTCCTCCTGGCCGACCAGCTGCAGATGTCCCTGTATGCCTCT
GGCCTCCTGACCGGAGTGGTGGTTGATTCTGGCTATGGCCTGACCCGCGTGCAGCCTTTCCACCAGGGCC
GCCCCTTGCCCGCCAGCGGCAAGACGCTGGAGTTCGCCGGCCAGGATCTCTCCGCCTATCTCCTCAAGAG
TCTCTTTAAGGAAGATTGCGATAGACGCTGCCTGTTTCAGCTGGAGACAGTCGCCGTGACTCAGATGAAC
AAGTGCTACGTGCCGCAGAATCTGGGGGAGGCCCTGGACTTTCGTGAGAGGCAGCAGAGTGCCTTGGATG
AGAGCAACACCTATCAGCTCCCAGACGGCTCCCGCGTGGAGCTGACCCCCATGCAGCGGGTGGCTCCTGA
GATGTTCTTTAGCCCGCAGGTGTTCGAGCAGCCGGGGCCCAGCATCCCACGGGCCATTGTGGAATCCGTG
GAGTCCTGCGAGATCTCCCTGCGCCCCCTGCTGGTCTCCCACGTGATGGCCTGCGGGGGCAACACCCTCT
ATCCCGGGTTCACAAAGCGCCTGTTCAGGGAGCTGATGGGGGATCACGTCTCCTCCACCAAGGCCACAGT
CTGGGAGGGTTCCAATAGAAACTTTAGTGTCTGGCTAGGAGCGTCCGTGGTGGCTCACCTTTCTACCTAC
CAGTCTGAGTGGATGTCCCGAGAGGAGTATGGTGAGCATATGAGGATGTGA

Translation (366 aa):
MAARTVIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPDTFSYPIERG
RILNWEGVQYLWSFVLENHRREQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYAS
GLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMN
KCYVPQNLGEALDFRERQQSALDESNTYQLPDGSRVELTPMQRVAPEMFFSPQVFEQPGPSIPRAIVESV
ESCEISLRPLLVSHVMACGGNTLYPGFTKRLFRELMGDHVSSTKATVWEGSNRNFSVWLGASVVAHLSTY
QSEWMSREEYGEHMRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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