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Report for CCDS6183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6183.1 Public Homo sapiens 8 DNAJC5B 24 110 108 CCDS HistoryNCBI Gene:85479Re-query CCDS DB by CCDS ID:6183.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276570.10 ENSP00000276570.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276570.10Link to Ensembl Protein Viewer:ENSP00000276570.5Re-query CCDS DB by Nucleotide ID:ENST00000276570Re-query CCDS DB by Protein ID:ENSP00000276570
Original member Current member NCBI NM_001349432.2 NP_001336361.1 Accepted alive Link to Nucleotide Sequence:NM_001349432.2Link to Protein Sequence:NP_001336361.1Re-query CCDS DB by Nucleotide ID:NM_001349432Re-query CCDS DB by Protein ID:NP_001336361Link to BLAST:NP_001336361.1
Original member Current member NCBI NM_033105.6 NP_149096.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033105.6Link to Protein Sequence:NP_149096.2Re-query CCDS DB by Nucleotide ID:NM_033105Re-query CCDS DB by Protein ID:NP_149096Link to BLAST:NP_149096.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001336361.1 199 Q9UF47 199 100% 0 0
NP_149096.2 199 Q9UF47 199 100% 0 0

Chromosomal Locations for CCDS 6183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 66051548 66051666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66076660 66076873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66080377 66080548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66099937 66100031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGGCATGTAACATACCTAACCAAAGACAGCGGACTCTGTCAACAACAGGAGAAGCTCTATACGAAATTC
TTGGTCTGCATAAGGGAGCATCAAATGAAGAAATTAAGAAAACCTACAGAAAATTGGCCCTGAAACACCA
TCCAGACAAGAATCCAGATGATCCAGCTGCTACTGAGAAGTTTAAAGAAATCAACAACGCCCACGCAATA
CTTACCGACATTTCAAAGAGAAGCATATACGACAAGTACGGATCGCTGGGACTCTACGTGGCCGAGCAGT
TTGGAGACGAAAACGTTAACACCTACTTCATGCTGTCGAGCTGGTGGGCAAAGGCCCTGTTTGTCATCGT
TGGCCTCTTGACGGGCTGCTACTTTTGCTGCTGCCTGTGCTGCTGCTGCAACTGCTGCTGTGGACACTGC
CGGCCCGAGTCATCAGTGCCAGAAGAGGACTTCTATGTGTCCCCAGAGGATCTGGAGGAGCAGATCAAGT
CTGACATGGAAAAAGATGTGGACTTTCCAGTTTTTCTCCAGCCTACAAATGCAAATGAGAAAACACAGCT
AATCAAAGAAGGATCTCGAAGTTATTGCACAGACTCTTGA

Translation (199 aa):
MACNIPNQRQRTLSTTGEALYEILGLHKGASNEEIKKTYRKLALKHHPDKNPDDPAATEKFKEINNAHAI
LTDISKRSIYDKYGSLGLYVAEQFGDENVNTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCCGHC
RPESSVPEEDFYVSPEDLEEQIKSDMEKDVDFPVFLQPTNANEKTQLIKEGSRSYCTDS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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